def skel_test_run(self, docker_image):
"""Create dummy analysis tree, run driver scripts and check output"""
with tempfile.TemporaryDirectory() as tmpdirname:
try:
print('NAME', __name__)
cur_dir = os.getcwd()
os.chdir(tmpdirname)
self.write_dummy_tree_and_init_git()
rflib.run(
Namespace(node='.',
recursive=True,
verbose=True,
dry_run=False,
docker_image=docker_image))
command = '''export LC_ALL=C; find . -name '*.txt' | sort | md5sum'''
o = subprocess.check_output(command, shell=True).decode()
self.assertTrue(
o.startswith('2be88994681ecef36d02636683a6bc9e'))
command = '''export LC_ALL=C; cat `find . -name '*.txt'` | sort | md5sum'''
o = subprocess.check_output(command, shell=True).decode()
self.assertTrue(
o.startswith('43682754c874d40b3667b2c7c7dc0e65'))
finally:
os.chdir(cur_dir)
def run(args):
""" Runs driver scripts throughout the tree
:param args:
:return:
"""
rflib.run(node=args.node, recursive=args.recursive,
verbose=args.verbose, dry_run=args.dry_run,
docker_image=args.docker_image)
def skel_test_run(self, docker_image):
"""Create dummy analysis tree, run driver scripts and check output"""
with tempfile.TemporaryDirectory() as tmpdirname:
try:
print('NAME', __name__)
cur_dir = os.getcwd()
os.chdir(tmpdirname)
self.write_dummy_tree_and_init_git()
rflib.run(Namespace(node='.', recursive=True, verbose=True, dry_run=False, docker_image=docker_image))
command = '''export LC_ALL=C; find . -name '*.txt' | sort | md5sum'''
o = subprocess.check_output(command, shell=True).decode()
self.assertTrue(o.startswith('2be88994681ecef36d02636683a6bc9e'))
command = '''export LC_ALL=C; cat `find . -name '*.txt'` | sort | md5sum'''
o = subprocess.check_output(command, shell=True).decode()
self.assertTrue(o.startswith('43682754c874d40b3667b2c7c7dc0e65'))
finally:
os.chdir(cur_dir)
