def setDefaults(self): """ """ self.colors = appDefaults.defaultForParameter("colors") self.UnSatisfactionMarker.set(appDefaults.defaultForParameter("UnSatisfactionMarker")) self.SatisfactionMarker.set(appDefaults.defaultForParameter("SatisfactionMarker")) self.radius.set(appDefaults.defaultForParameter("radius"))
def setDefaults(self): """ """ self.densityPanel.gradient.set(appDefaults.defaultForParameter("gradient")) self.selectedMethod.set(appDefaults.defaultForParameter("method")) self.url.set(appDefaults.defaultForParameter("urlPDB")) self.rangeCutOff.set(appDefaults.defaultForParameter("rangeCutOff")) self.densityPanel.gradientSelection['values'] = appDefaults.defaultForParameter('gradientColorList') self.sticksPanel.setDefaults()
def showNOEDensity(structure='', managerName="", residuesList='all', dist_range='all', violationState='all', violCutoff=appDefaults.defaultForParameter("cutOff"), rangeCutOff=appDefaults.defaultForParameter("rangeCutOff"), method=appDefaults.defaultForParameter('method'), colors=appDefaults.defaultForParameter("gradient")): """ """ PyNMRCLI.showNOEDensity(structure, managerName, residuesList, dist_range, violationState, violCutoff, rangeCutOff, method, colors)
def showNOE(structure='', managerName="", residuesList='all', dist_range='all', violationState='all', violCutoff=appDefaults.defaultForParameter("cutOff"), method=appDefaults.defaultForParameter('method'), radius=appDefaults.defaultForParameter("radius"), colors=appDefaults.defaultForParameter("colors"), rangeCutOff=appDefaults.defaultForParameter("rangeCutOff"), UnSatisfactionMarker=appDefaults.defaultForParameter("UnSatisfactionMarker"), SatisfactionMarker=appDefaults.defaultForParameter("SatisfactionMarker")): """ """ PyNMRCLI.showNOE(structure, managerName, residuesList, dist_range, violationState, violCutoff, method, radius, colors, rangeCutOff, UnSatisfactionMarker, SatisfactionMarker)
def loadAndShow(filename, structure='', residuesList='all', dist_range='all', violationState='all', violCutoff=appDefaults.defaultForParameter("cutOff"), method=appDefaults.defaultForParameter('method'), rangeCutOff=appDefaults.defaultForParameter("rangeCutOff"), radius=appDefaults.defaultForParameter("radius"), colors=appDefaults.defaultForParameter("colors"), UnSatisfactionMarker=appDefaults.defaultForParameter("UnSatisfactionMarker"), SatisfactionMarker=appDefaults.defaultForParameter("SatisfactionMarker")): """ """ PyNMRCLI.loadAndShow(filename, structure, residuesList, dist_range, violationState, violCutoff, method, rangeCutOff, radius, colors, UnSatisfactionMarker, SatisfactionMarker)
def setDefaults(self): self.violationsFrame.cutOff.set(defaultForParameter("cutOff")) self.structureManagement.comboPDB.values = MVI.getModelsNames(defaultForParameter('SatisfactionMarker'), defaultForParameter('UnSatisfactionMarker'))
def downloadNMR(pdbCode, url=appDefaults.defaultForParameter("urlPDB")): """ """ PyNMRCLI.downloadNMR(pdbCode, url)