def testJobPrint(self):
from Ganga.GPI import full_print
# just want to check there is no error here. Its hard to test this
# automatically
logger.info(self.test_job)
# now try full_print
full_print(self.test_job)
def testJobPrint(self):
from Ganga.GPI import full_print
# just want to check there is no error here. Its hard to test this
# automatically
logger.info(self.test_job)
# now try full_print
full_print(self.test_job)
def testFullPrintingGPIObjectList(self):
from Ganga.GPI import full_print, GangaList
g = GangaList()
for _ in range(10):
g.append(self._makeRandomTFile())
g_string = str(g)
import StringIO
sio = StringIO.StringIO()
full_print(g, sio)
assert g_string == str(sio.getvalue()).rstrip(), 'Orphaned lists should full_print'
def testFullPrintingGPIObjectList(self):
from Ganga.GPI import full_print, GangaList
g = GangaList()
for _ in range(10):
g.append(self._makeRandomTFile())
g_string = str(g)
import StringIO
sio = StringIO.StringIO()
full_print(g, sio)
assert g_string == str(sio.getvalue()).rstrip(), 'Orphaned lists should full_print'
def report_inner(job=None, isJob=False, isTask=False):
userInfoDirName = "userreport"
tempDirName = "reportsRepository"
# job relevant info
jobSummaryFileName = "jobsummary.txt"
jobFullPrintFileName = "jobfullprint.txt"
repositoryPath = "repository/$usr/LocalXML/6.0/jobs/$thousandsNumxxx"
# task relevant info
taskSummaryFileName = "tasksummary.txt"
taskFullPrintFileName = "taskfullprint.txt"
tasksRepositoryPath = "repository/$usr/LocalXML/6.0/tasks/$thousandsNumxxx"
# user's info
environFileName = "environ.txt"
userConfigFileName = "userconfig.txt"
defaultConfigFileName = "gangarc.txt"
ipythonHistoryFileName = "ipythonhistory.txt"
gangaLogFileName = "gangalog.txt"
jobsListFileName = "jobslist.txt"
tasksListFileName = "taskslist.txt"
from Ganga.Utility import Config
uploadFileServer = Config.getConfig('Feedback')['uploadServer']
#uploadFileServer= "http://gangamon.cern.ch/django/errorreports/"
#uploadFileServer= "http://ganga-ai-02.cern.ch/django/errorreports/"
#uploadFileServer= "http://127.0.0.1:8000/errorreports"
def printDictionary(dictionary, file=sys.stdout):
for k, v in dictionary.iteritems():
print('%s: %s' % (k, v), file=file)
if k == 'PYTHONPATH':
global PYTHON_PATH
PYTHON_PATH = v
def extractFileObjects(fileName, targetDirectoryName):
try:
fileToRead = open(fileName, 'r')
try:
fileText = fileToRead.read()
import re
pattern = "File\(name=\'(.+?)\'"
matches = re.findall(pattern, fileText)
for fileName in matches:
fileName = os.path.expanduser(fileName)
targetFileName = os.path.join(
targetDirectoryName, os.path.basename(fileName))
shutil.copyfile(fileName, targetFileName)
finally:
fileToRead.close()
# except IOError, OSError:
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
def writeErrorLog(errorMessage):
try:
fileToWrite = open(errorLogPath, 'a')
try:
fileToWrite.write(errorMessage)
fileToWrite.write("\n")
except Exception as err:
logger.debug("Err: %s" % str(err))
raise
finally:
fileToWrite.close()
except Exception as err2:
logger.debug("Err: %s" % str(err2))
pass
def writeStringToFile(fileName, stringToWrite):
try:
# uncomment this to try the error logger
#fileName = '~/' + fileName
fileToWrite = open(fileName, 'w')
try:
fileToWrite.write(stringToWrite)
except Exception as err:
logger.debug("Err: %s" % str(err))
raise err
finally:
fileToWrite.close()
# except IOError:
except Exception as err:
logger.debug("Err2: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
def renameDataFiles(directory):
for fileName in os.listdir(directory):
fullFileName = os.path.join(directory, fileName)
if os.path.isfile(fullFileName):
if fileName == 'data':
os.rename(fullFileName, fullFileName + '.txt')
else:
renameDataFiles(fullFileName)
import shutil
import tarfile
import tempfile
import os
userHomeDir = os.getenv("HOME")
tempDir = tempfile.mkdtemp()
errorLogPath = os.path.join(tempDir, 'reportErrorLog.txt')
fullPathTempDir = os.path.join(tempDir, tempDirName)
fullLogDirName = ''
# create temp dir and specific dir for the job/user
try:
if not os.path.exists(fullPathTempDir):
os.mkdir(fullPathTempDir)
import datetime
now = datetime.datetime.now()
userInfoDirName = userInfoDirName + \
now.strftime("%Y-%m-%d-%H:%M:%S")
fullLogDirName = os.path.join(fullPathTempDir, userInfoDirName)
# if report directory exists -> delete it's content(we would like
# last version of the report)
if os.path.exists(fullLogDirName):
shutil.rmtree(fullLogDirName)
os.mkdir(fullLogDirName)
# except OSError:
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# import os.environ in a file
fullEnvironFileName = os.path.join(fullLogDirName, environFileName)
try:
inputFile = open(fullEnvironFileName, 'w')
try:
printDictionary(os.environ, file=inputFile)
print('OS VERSION : ' + platform.platform(), file=inputFile)
finally:
inputFile.close()
# except IOError
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# import user config in a file
userConfigFullFileName = os.path.join(
fullLogDirName, userConfigFileName)
try:
inputFile = open(userConfigFullFileName, 'w')
try:
print("#GANGA_VERSION = %s" %
config.System.GANGA_VERSION, file=inputFile)
global GANGA_VERSION
GANGA_VERSION = config.System.GANGA_VERSION
# this gets the default values
# Ganga.GPIDev.Lib.Config.Config.print_config_file()
# this should get the changed values
for c in config:
print(config[c], file=inputFile)
finally:
inputFile.close()
# except IOError does not catch the exception ???
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# write gangarc - default configuration
defaultConfigFullFileName = os.path.join(
fullLogDirName, defaultConfigFileName)
try:
outputFile = open(os.path.join(userHomeDir, '.gangarc'), 'r')
try:
writeStringToFile(defaultConfigFullFileName, outputFile.read())
finally:
outputFile.close()
# except IOError does not catch the exception ???
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# import ipython history in a file
try:
ipythonFile = open(
os.path.join(os.environ['IPYTHONDIR'], 'history'), 'r')
try:
lastIPythonCommands = ipythonFile.readlines()[-20:]
writeStringToFile(os.path.join(
fullLogDirName, ipythonHistoryFileName), '\n'.join(lastIPythonCommands))
#writeStringToFile(os.path.join(fullLogDirName, ipythonHistoryFileName), ipythonFile.read())
finally:
ipythonFile.close()
# except IOError does not catch the exception ???
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# import gangalog in a file
userLogFileLocation = config["Logging"]._logfile
userLogFileLocation = os.path.expanduser(userLogFileLocation)
try:
gangaLogFile = open(userLogFileLocation, 'r')
try:
writeStringToFile(
os.path.join(fullLogDirName, gangaLogFileName), gangaLogFile.read())
finally:
gangaLogFile.close()
# except IOError:
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# import the result of jobs command in the report
jobsListFullFileName = os.path.join(fullLogDirName, jobsListFileName)
try:
outputFile = open(jobsListFullFileName, 'w')
try:
from Ganga.GPI import jobs
print(jobs, file=outputFile)
finally:
outputFile.close()
# except IOError does not catch the exception ???
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# import the result of tasks command in the report
tasksListFullFileName = os.path.join(fullLogDirName, tasksListFileName)
try:
outputFile = open(tasksListFullFileName, 'w')
try:
from Ganga.GPI import tasks
print(tasks, file=outputFile)
finally:
outputFile.close()
# except IOError does not catch the exception ???
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# save it here because we will change fullLogDirName, but we want this
# to be the archive and to be deleted
folderToArchive = fullLogDirName
# import job relevant info
if (job is not None and isJob):
global JOB_REPORT, APPLICATION_NAME, BACKEND_NAME
JOB_REPORT = True
APPLICATION_NAME = job.application.__class__.__name__
BACKEND_NAME = job.backend.__class__.__name__
# create job folder
jobFolder = 'job_%s' % str(job.fqid)
fullLogDirName = os.path.join(fullLogDirName, jobFolder)
os.mkdir(fullLogDirName)
# import job summary in a file
fullJobSummaryFileName = os.path.join(
fullLogDirName, jobSummaryFileName)
writeStringToFile(fullJobSummaryFileName, str(job))
# import job full print in a file
fullJobPrintFileName = os.path.join(
fullLogDirName, jobFullPrintFileName)
try:
inputFile = open(fullJobPrintFileName, 'w')
try:
full_print(job, inputFile)
finally:
inputFile.close()
# except IOError, OSError:
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# extract file objects
try:
fileObjectsPath = os.path.join(fullLogDirName, 'fileobjects')
os.mkdir(fileObjectsPath)
extractFileObjects(fullJobSummaryFileName, fileObjectsPath)
# except OSError:
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# copy dir of the job ->input/output and subjobs
try:
parentDir, currentDir = os.path.split(job.inputdir[:-1])
workspaceDir = os.path.join(fullLogDirName, 'workspace')
shutil.copytree(parentDir, workspaceDir)
# except IOError, OSError
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# copy shared area of the job
try:
if hasattr(job.application, 'is_prepared'):
if job.application.is_prepared is not None and job.application.is_prepared is not True:
import os
from Ganga.Utility.Config import getConfig
from Ganga.Utility.files import expandfilename
shared_path = os.path.join(expandfilename(getConfig(
'Configuration')['gangadir']), 'shared', getConfig('Configuration')['user'])
shareddir = os.path.join(
shared_path, job.application.is_prepared.name)
if os.path.isdir(shareddir):
sharedAreaDir = os.path.join(
fullLogDirName, 'sharedarea')
shutil.copytree(shareddir, sharedAreaDir)
# except IOError, OSError
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# copy repository job file
try:
indexFileName = str(job.id) + '.index'
repositoryPath = repositoryPath.replace(
'$usr', os.getenv("USER"))
# check if the job is subjob -> different way of forming the
# path to the repository
is_subjob = job.fqid.find('.') > -1
if is_subjob:
jobid, subjobid = job.fqid.split(
'.')[0], job.fqid.split('.')[1]
repositoryPath = repositoryPath.replace(
'$thousandsNum', str(int(jobid) / 1000))
repositoryPath = os.path.join(repositoryPath, jobid)
else:
repositoryPath = repositoryPath.replace(
'$thousandsNum', str(job.id / 1000))
repositoryFullPath = os.path.join(
config.Configuration.gangadir, repositoryPath)
indexFileSourcePath = os.path.join(
repositoryFullPath, indexFileName)
repositoryFullPath = os.path.join(
repositoryFullPath, str(job.id))
repositoryTargetPath = os.path.join(
fullLogDirName, 'repository', str(job.id))
os.mkdir(os.path.join(fullLogDirName, 'repository'))
shutil.copytree(repositoryFullPath, repositoryTargetPath)
# data files are copied but can not be opened -> add .txt to
# their file names
renameDataFiles(repositoryTargetPath)
if not is_subjob:
# copy .index file
indexFileTargetPath = os.path.join(
fullLogDirName, 'repository', indexFileName)
shutil.copyfile(indexFileSourcePath, indexFileTargetPath)
# except OSError, IOError:
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# import task relevant info
if (job is not None and isTask):
# job is actually a task object
task = job
# create task folder
taskFolder = 'task_%s' % str(task.id)
fullLogDirName = os.path.join(fullLogDirName, taskFolder)
os.mkdir(fullLogDirName)
# import task summary in a file
fullTaskSummaryFileName = os.path.join(
fullLogDirName, taskSummaryFileName)
writeStringToFile(fullTaskSummaryFileName, str(task))
# import task full print in a file
fullTaskPrintFileName = os.path.join(
fullLogDirName, taskFullPrintFileName)
try:
inputFile = open(fullTaskPrintFileName, 'w')
try:
full_print(task, inputFile)
except Exception as err:
logger.debug("Err: %s" % str(err))
raise err
finally:
inputFile.close()
# except IOError, OSError:
except Exception as err:
logger.debug("Err2: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# copy shared area of the task
try:
if len(task.transforms) > 0:
if hasattr(task.transforms[0], 'application') and hasattr(task.transforms[0].application, 'is_prepared'):
if task.transforms[0].application.is_prepared is not None and task.transforms[0].application.is_prepared is not True:
import os
from Ganga.Utility.Config import getConfig
from Ganga.Utility.files import expandfilename
shared_path = os.path.join(expandfilename(getConfig(
'Configuration')['gangadir']), 'shared', getConfig('Configuration')['user'])
shareddir = os.path.join(
shared_path, task.transforms[0].application.is_prepared.name)
if os.path.isdir(shareddir):
sharedAreaDir = os.path.join(
fullLogDirName, 'sharedarea')
shutil.copytree(shareddir, sharedAreaDir)
# except IOError, OSError
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# copy repository task file
try:
indexFileName = str(task.id) + '.index'
tasksRepositoryPath = tasksRepositoryPath.replace(
'$usr', os.getenv("USER"))
tasksRepositoryPath = tasksRepositoryPath.replace(
'$thousandsNum', str(task.id / 1000))
repositoryFullPath = os.path.join(
config.Configuration.gangadir, tasksRepositoryPath)
indexFileSourcePath = os.path.join(
repositoryFullPath, indexFileName)
repositoryFullPath = os.path.join(
repositoryFullPath, str(task.id))
repositoryTargetPath = os.path.join(
fullLogDirName, 'repository', str(task.id))
os.mkdir(os.path.join(fullLogDirName, 'repository'))
shutil.copytree(repositoryFullPath, repositoryTargetPath)
# data files are copied but can not be opened -> add .txt to
# their file names
renameDataFiles(repositoryTargetPath)
# copy .index file
indexFileTargetPath = os.path.join(
fullLogDirName, 'repository', indexFileName)
shutil.copyfile(indexFileSourcePath, indexFileTargetPath)
# except OSError, IOError:
except Exception as err:
logger.debug("Err %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
resultArchive = '%s.tar.gz' % folderToArchive
try:
resultFile = tarfile.TarFile.open(resultArchive, 'w:gz')
try:
resultFile.add(
folderToArchive, arcname=os.path.basename(folderToArchive))
# put the error log in the archive
if(os.path.exists(errorLogPath)):
resultFile.add(
errorLogPath, arcname=os.path.basename(errorLogPath))
except Exception as err:
logger.debug("Err: %s" % str(err))
raise
finally:
resultFile.close()
except Exception as err:
logger.debug("Err2: %s" % str(err))
raise # pass
# remove temp dir
if(os.path.exists(folderToArchive)):
shutil.rmtree(folderToArchive)
# print the error if there is something
if os.path.exists(errorLogPath):
logger.error('')
logger.error('An error occured while collecting report information : ' + open(errorLogPath, 'r').read())
logger.error('')
# delete the errorfile from user's pc
if(os.path.exists(errorLogPath)):
os.remove(errorLogPath)
# return the path to the archive and the path to the upload server
return (resultArchive, uploadFileServer, tempDir)
def report_inner(job=None, isJob=False, isTask=False):
userInfoDirName = "userreport"
tempDirName = "reportsRepository"
# job relevant info
jobSummaryFileName = "jobsummary.txt"
jobFullPrintFileName = "jobfullprint.txt"
repositoryPath = "repository/$usr/LocalXML/6.0/jobs/$thousandsNumxxx"
# task relevant info
taskSummaryFileName = "tasksummary.txt"
taskFullPrintFileName = "taskfullprint.txt"
tasksRepositoryPath = "repository/$usr/LocalXML/6.0/tasks/$thousandsNumxxx"
# user's info
environFileName = "environ.txt"
userConfigFileName = "userconfig.txt"
defaultConfigFileName = "gangarc.txt"
ipythonHistoryFileName = "ipythonhistory.txt"
gangaLogFileName = "gangalog.txt"
jobsListFileName = "jobslist.txt"
tasksListFileName = "taskslist.txt"
from Ganga.Utility import Config
uploadFileServer = Config.getConfig('Feedback')['uploadServer']
#uploadFileServer= "http://gangamon.cern.ch/django/errorreports/"
#uploadFileServer= "http://ganga-ai-02.cern.ch/django/errorreports/"
#uploadFileServer= "http://127.0.0.1:8000/errorreports"
def printDictionary(dictionary, file=sys.stdout):
for k, v in dictionary.iteritems():
print('%s: %s' % (k, v), file=file)
if k == 'PYTHONPATH':
global PYTHON_PATH
PYTHON_PATH = v
def extractFileObjects(fileName, targetDirectoryName):
try:
fileToRead = open(fileName, 'r')
try:
fileText = fileToRead.read()
import re
pattern = "File\(name=\'(.+?)\'"
matches = re.findall(pattern, fileText)
for fileName in matches:
fileName = os.path.expanduser(fileName)
targetFileName = os.path.join(
targetDirectoryName, os.path.basename(fileName))
shutil.copyfile(fileName, targetFileName)
finally:
fileToRead.close()
# except IOError, OSError:
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
def writeErrorLog(errorMessage):
try:
fileToWrite = open(errorLogPath, 'a')
try:
fileToWrite.write(errorMessage)
fileToWrite.write("\n")
except Exception as err:
logger.debug("Err: %s" % str(err))
raise
finally:
fileToWrite.close()
except Exception as err2:
logger.debug("Err: %s" % str(err2))
pass
def writeStringToFile(fileName, stringToWrite):
try:
# uncomment this to try the error logger
#fileName = '~/' + fileName
fileToWrite = open(fileName, 'w')
try:
fileToWrite.write(stringToWrite)
except Exception as err:
logger.debug("Err: %s" % str(err))
raise err
finally:
fileToWrite.close()
# except IOError:
except Exception as err:
logger.debug("Err2: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
def renameDataFiles(directory):
for fileName in os.listdir(directory):
fullFileName = os.path.join(directory, fileName)
if os.path.isfile(fullFileName):
if fileName == 'data':
os.rename(fullFileName, fullFileName + '.txt')
else:
renameDataFiles(fullFileName)
import shutil
import tarfile
import tempfile
import os
userHomeDir = os.getenv("HOME")
tempDir = tempfile.mkdtemp()
errorLogPath = os.path.join(tempDir, 'reportErrorLog.txt')
fullPathTempDir = os.path.join(tempDir, tempDirName)
fullLogDirName = ''
# create temp dir and specific dir for the job/user
try:
if not os.path.exists(fullPathTempDir):
os.mkdir(fullPathTempDir)
import datetime
now = datetime.datetime.now()
userInfoDirName = userInfoDirName + \
now.strftime("%Y-%m-%d-%H:%M:%S")
fullLogDirName = os.path.join(fullPathTempDir, userInfoDirName)
# if report directory exists -> delete it's content(we would like
# last version of the report)
if os.path.exists(fullLogDirName):
shutil.rmtree(fullLogDirName)
os.mkdir(fullLogDirName)
# except OSError:
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# import os.environ in a file
fullEnvironFileName = os.path.join(fullLogDirName, environFileName)
try:
inputFile = open(fullEnvironFileName, 'w')
try:
printDictionary(os.environ, file=inputFile)
print('OS VERSION : ' + platform.platform(), file=inputFile)
finally:
inputFile.close()
# except IOError
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# import user config in a file
userConfigFullFileName = os.path.join(
fullLogDirName, userConfigFileName)
try:
inputFile = open(userConfigFullFileName, 'w')
try:
print("#GANGA_VERSION = %s" %
config.System.GANGA_VERSION, file=inputFile)
global GANGA_VERSION
GANGA_VERSION = config.System.GANGA_VERSION
# this gets the default values
# Ganga.GPIDev.Lib.Config.Config.print_config_file()
# this should get the changed values
for c in config:
print(config[c], file=inputFile)
finally:
inputFile.close()
# except IOError does not catch the exception ???
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# write gangarc - default configuration
defaultConfigFullFileName = os.path.join(
fullLogDirName, defaultConfigFileName)
try:
outputFile = open(os.path.join(userHomeDir, '.gangarc'), 'r')
try:
writeStringToFile(defaultConfigFullFileName, outputFile.read())
finally:
outputFile.close()
# except IOError does not catch the exception ???
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# import ipython history in a file
try:
ipythonFile = open(
os.path.join(os.environ['IPYTHONDIR'], 'history'), 'r')
try:
lastIPythonCommands = ipythonFile.readlines()[-20:]
writeStringToFile(os.path.join(
fullLogDirName, ipythonHistoryFileName), '\n'.join(lastIPythonCommands))
#writeStringToFile(os.path.join(fullLogDirName, ipythonHistoryFileName), ipythonFile.read())
finally:
ipythonFile.close()
# except IOError does not catch the exception ???
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# import gangalog in a file
userLogFileLocation = config["Logging"]._logfile
userLogFileLocation = os.path.expanduser(userLogFileLocation)
try:
gangaLogFile = open(userLogFileLocation, 'r')
try:
writeStringToFile(
os.path.join(fullLogDirName, gangaLogFileName), gangaLogFile.read())
finally:
gangaLogFile.close()
# except IOError:
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# import the result of jobs command in the report
jobsListFullFileName = os.path.join(fullLogDirName, jobsListFileName)
try:
outputFile = open(jobsListFullFileName, 'w')
try:
from Ganga.GPI import jobs
print(jobs, file=outputFile)
finally:
outputFile.close()
# except IOError does not catch the exception ???
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# import the result of tasks command in the report
tasksListFullFileName = os.path.join(fullLogDirName, tasksListFileName)
try:
outputFile = open(tasksListFullFileName, 'w')
try:
from Ganga.GPI import tasks
print(tasks, file=outputFile)
finally:
outputFile.close()
# except IOError does not catch the exception ???
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# save it here because we will change fullLogDirName, but we want this
# to be the archive and to be deleted
folderToArchive = fullLogDirName
# import job relevant info
if (job is not None and isJob):
global JOB_REPORT, APPLICATION_NAME, BACKEND_NAME
JOB_REPORT = True
APPLICATION_NAME = getName(job.application)
BACKEND_NAME = getName(job.backend)
# create job folder
jobFolder = 'job_%s' % str(job.fqid)
fullLogDirName = os.path.join(fullLogDirName, jobFolder)
os.mkdir(fullLogDirName)
# import job summary in a file
fullJobSummaryFileName = os.path.join(
fullLogDirName, jobSummaryFileName)
writeStringToFile(fullJobSummaryFileName, str(job))
# import job full print in a file
fullJobPrintFileName = os.path.join(
fullLogDirName, jobFullPrintFileName)
try:
inputFile = open(fullJobPrintFileName, 'w')
try:
full_print(job, inputFile)
finally:
inputFile.close()
# except IOError, OSError:
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# extract file objects
try:
fileObjectsPath = os.path.join(fullLogDirName, 'fileobjects')
os.mkdir(fileObjectsPath)
extractFileObjects(fullJobSummaryFileName, fileObjectsPath)
# except OSError:
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# copy dir of the job ->input/output and subjobs
try:
parentDir, currentDir = os.path.split(job.inputdir[:-1])
workspaceDir = os.path.join(fullLogDirName, 'workspace')
shutil.copytree(parentDir, workspaceDir)
# except IOError, OSError
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# copy shared area of the job
try:
if hasattr(job.application, 'is_prepared'):
if job.application.is_prepared is not None and job.application.is_prepared is not True:
import os
from Ganga.Utility.Config import getConfig
from Ganga.Utility.files import expandfilename
shared_path = os.path.join(expandfilename(getConfig(
'Configuration')['gangadir']), 'shared', getConfig('Configuration')['user'])
shareddir = os.path.join(
shared_path, job.application.is_prepared.name)
if os.path.isdir(shareddir):
sharedAreaDir = os.path.join(
fullLogDirName, 'sharedarea')
shutil.copytree(shareddir, sharedAreaDir)
# except IOError, OSError
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# copy repository job file
try:
indexFileName = str(job.id) + '.index'
repositoryPath = repositoryPath.replace(
'$usr', os.getenv("USER"))
# check if the job is subjob -> different way of forming the
# path to the repository
is_subjob = job.fqid.find('.') > -1
if is_subjob:
jobid, subjobid = job.fqid.split(
'.')[0], job.fqid.split('.')[1]
repositoryPath = repositoryPath.replace(
'$thousandsNum', str(int(jobid) / 1000))
repositoryPath = os.path.join(repositoryPath, jobid)
else:
repositoryPath = repositoryPath.replace(
'$thousandsNum', str(job.id / 1000))
repositoryFullPath = os.path.join(
config.Configuration.gangadir, repositoryPath)
indexFileSourcePath = os.path.join(
repositoryFullPath, indexFileName)
repositoryFullPath = os.path.join(
repositoryFullPath, str(job.id))
repositoryTargetPath = os.path.join(
fullLogDirName, 'repository', str(job.id))
os.mkdir(os.path.join(fullLogDirName, 'repository'))
shutil.copytree(repositoryFullPath, repositoryTargetPath)
# data files are copied but can not be opened -> add .txt to
# their file names
renameDataFiles(repositoryTargetPath)
if not is_subjob:
# copy .index file
indexFileTargetPath = os.path.join(
fullLogDirName, 'repository', indexFileName)
shutil.copyfile(indexFileSourcePath, indexFileTargetPath)
# except OSError, IOError:
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# import task relevant info
if (job is not None and isTask):
# job is actually a task object
task = job
# create task folder
taskFolder = 'task_%s' % str(task.id)
fullLogDirName = os.path.join(fullLogDirName, taskFolder)
os.mkdir(fullLogDirName)
# import task summary in a file
fullTaskSummaryFileName = os.path.join(
fullLogDirName, taskSummaryFileName)
writeStringToFile(fullTaskSummaryFileName, str(task))
# import task full print in a file
fullTaskPrintFileName = os.path.join(
fullLogDirName, taskFullPrintFileName)
try:
inputFile = open(fullTaskPrintFileName, 'w')
try:
full_print(task, inputFile)
except Exception as err:
logger.debug("Err: %s" % str(err))
raise err
finally:
inputFile.close()
# except IOError, OSError:
except Exception as err:
logger.debug("Err2: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# copy shared area of the task
try:
if len(task.transforms) > 0:
if hasattr(task.transforms[0], 'application') and hasattr(task.transforms[0].application, 'is_prepared'):
if task.transforms[0].application.is_prepared is not None and task.transforms[0].application.is_prepared is not True:
import os
from Ganga.Utility.Config import getConfig
from Ganga.Utility.files import expandfilename
shared_path = os.path.join(expandfilename(getConfig(
'Configuration')['gangadir']), 'shared', getConfig('Configuration')['user'])
shareddir = os.path.join(
shared_path, task.transforms[0].application.is_prepared.name)
if os.path.isdir(shareddir):
sharedAreaDir = os.path.join(
fullLogDirName, 'sharedarea')
shutil.copytree(shareddir, sharedAreaDir)
# except IOError, OSError
except Exception as err:
logger.debug("Err: %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
# copy repository task file
try:
indexFileName = str(task.id) + '.index'
tasksRepositoryPath = tasksRepositoryPath.replace(
'$usr', os.getenv("USER"))
tasksRepositoryPath = tasksRepositoryPath.replace(
'$thousandsNum', str(task.id / 1000))
repositoryFullPath = os.path.join(
config.Configuration.gangadir, tasksRepositoryPath)
indexFileSourcePath = os.path.join(
repositoryFullPath, indexFileName)
repositoryFullPath = os.path.join(
repositoryFullPath, str(task.id))
repositoryTargetPath = os.path.join(
fullLogDirName, 'repository', str(task.id))
os.mkdir(os.path.join(fullLogDirName, 'repository'))
shutil.copytree(repositoryFullPath, repositoryTargetPath)
# data files are copied but can not be opened -> add .txt to
# their file names
renameDataFiles(repositoryTargetPath)
# copy .index file
indexFileTargetPath = os.path.join(
fullLogDirName, 'repository', indexFileName)
shutil.copyfile(indexFileSourcePath, indexFileTargetPath)
# except OSError, IOError:
except Exception as err:
logger.debug("Err %s" % str(err))
writeErrorLog(str(sys.exc_info()[1]))
resultArchive = '%s.tar.gz' % folderToArchive
try:
resultFile = tarfile.TarFile.open(resultArchive, 'w:gz')
try:
resultFile.add(
folderToArchive, arcname=os.path.basename(folderToArchive))
# put the error log in the archive
if(os.path.exists(errorLogPath)):
resultFile.add(
errorLogPath, arcname=os.path.basename(errorLogPath))
except Exception as err:
logger.debug("Err: %s" % str(err))
raise
finally:
resultFile.close()
except Exception as err:
logger.debug("Err2: %s" % str(err))
raise # pass
# remove temp dir
if(os.path.exists(folderToArchive)):
shutil.rmtree(folderToArchive)
# print the error if there is something
if os.path.exists(errorLogPath):
logger.error('')
logger.error('An error occured while collecting report information : ' + open(errorLogPath, 'r').read())
logger.error('')
# delete the errorfile from user's pc
if(os.path.exists(errorLogPath)):
os.remove(errorLogPath)
# return the path to the archive and the path to the upload server
return (resultArchive, uploadFileServer, tempDir)
