def index(self, **kwargs):
u = cherrypy.user.name
output = ""
t = common.getCookie('datamaster_table')
#select any tables
if kwargs.has_key('select_table'):
t = kwargs['select_table']
common.setCookie('datamaster_table', t)
if t:
table = "%s_%s" % (t, u)
var_table = "%s_%s_vars" % (t, u)
sid, trial, IVs, DVs, run, outlier, sids = common.getVariables(table, sids=True)
posts = mt.MongoAdmin("datamaster").db[var_table].posts
if kwargs.has_key('set_op'):
output += self.query(table, kwargs)
if kwargs.has_key('new_var'):
output += self.create(table, kwargs)
if kwargs.has_key('merge_var'):
output += self.merge(table, kwargs)
if kwargs.has_key('op-outlier-recurse-field'):
output += self.outlier(table, kwargs)
keys = posts.find().distinct('name')
condition = getCondition(var_options=keys, label='If (optional)')
setter = getSetter(var_options=keys, label='Set (required)')
modify = getForm(condition + setter, modify_url, legend='transform a variable')
create = getForm(template.get_def("create_column").render(var_options=keys), modify_url)
merge = getForm(template.get_def("merge_column").render(var_options=keys), modify_url)
preview = common.preview(table, kwargs, modify_url)
outliers = common.outlierReport(mt.MongoAdmin("datamaster").db[table].posts) + getForm(template.get_def("mark_outliers").render(DVs=DVs), modify_url)
else:
modify = no_table
create = no_table
merge = no_table
preview = no_table
outliers = no_table
items = [['select table', select_table(modify_url, t)], ['create', create], ['merge', merge], ['modify', modify], ['detect outliers', outliers], ['preview', preview]]
output += getAccordion(items, contentID='modify-small')
return getPage(output, "modify", "modify")
def index(self, **kwargs):
u = cherrypy.user.name
up = mt.MongoAdmin("datamaster").db["user_files"].posts
output = ""
aggregate = ""
table = common.getCookie("datamaster_table")
# select any tables
if kwargs.has_key("select_table"):
table = kwargs["select_table"]
common.setCookie("datamaster_table", table)
if table:
tableName = "%s_%s_vars" % (table, cherrypy.user.name)
posts = mt.MongoAdmin("datamaster").db[tableName].posts
IVs = posts.find({"var_type": "IV"}).distinct("name")
DVs = posts.find({"var_type": "DV"}).distinct("name")
# aggregate, download
datatable = "%s_%s" % (table, cherrypy.user.name)
agg_out = common.checkVariables(datatable, ["subject", "trial"])
if agg_out:
aggregate = agg_out
download_raw = agg_out
multi_sub = agg_out
else:
aggregate = self.agg(table)
download_raw = self.raw(table)
multi_sub = self.onefile(table)
# make_prts
prts_out = common.checkVariables(datatable, ["subject", "trial", "run"])
if prts_out:
make_prts = prts_out
else:
make_prts = self.make_prts(table)
if kwargs.has_key("dl"):
if kwargs["dl"] == "agg":
output += self.aggregate(table, kwargs)
elif kwargs["dl"] == "multi":
output += self.get_onefile(table, kwargs)
else:
output += self.get_raw(table, kwargs)
elif kwargs.has_key("prt_onset"):
output += self.prts(table, kwargs)
else:
aggregate = no_table
download_raw = no_table
make_prts = no_table
multi_sub = no_table
dl = "<p>"
fcount = 1
for row in up.find({"user": u}):
dl += "File %s : <a href='%s/output/%s'>%s</a><br/>" % (fcount, domain, row["fname"], row["fname"])
fcount += 1
dl += "</p>"
items = [
["select table", select_table(download_url, table)],
["aggregate", aggregate],
["download multi-subject file", multi_sub],
["create single subject files", download_raw],
["make PRTs", make_prts],
["download existing file", dl],
]
output += getAccordion(items, contentID="download-small")
return getPage(output, "download", "download")
def index(self, **kwargs):
cookie = cherrypy.request.cookie
u = cherrypy.user.name
#establish a table from the cookie
table = common.getCookie("datamaster_table")
#user has selected a table
if kwargs.has_key('select'):
table = kwargs['select']
common.setCookie('datamaster_table', table)
#user has removed a table
if kwargs.has_key('remove'):
p = mt.MongoAdmin("datamaster").db["user_tables"].posts
t = kwargs['remove']
#is this the currently active table?
if table == t:
common.removeCookie('datamaster_table', table)
table = None
mt.MongoAdmin("datamaster").db.drop_collection("%s_%s.posts" % (t, u))
mt.MongoAdmin("datamaster").db.drop_collection("%s_%s_vars.posts" % (t, u))
p.remove({'user':u, 'table':t})
mt.MongoAdmin("datamaster").db["user_ul_files"].posts.remove({'user':u, 'table':t})
common.activity_log('manage', 'remove table', t, kwargs)
select_table, remove_table = self.table_choice(table, kwargs)
#user has selected some variable
if kwargs.has_key('choose'):
if kwargs['choose'] == 'vars':
datatable = "%s_%s" % (table, cherrypy.user.name)
tableName = "%s_%s_vars" % (table, cherrypy.user.name)
posts = mt.MongoAdmin("datamaster").db[tableName].posts
for k in kwargs.keys():
posts.remove({'name':k})
posts.update({'name':k}, {'$set':{'var_type':kwargs[k]}}, upsert=True)
common.activity_log("manage", "choose", table, kwargs)
#if there's an active table
if table:
choose_vars = self.chooseVars(table)
review_vars = common.variableTable("%s_%s" % (table, u))
preview = common.preview("%s_%s" % (table, u), kwargs, manage_url)
else:
choose_vars = no_table
review_vars = no_table
preview = no_table
items = [['select table', select_table], ['choose variables', choose_vars], ['review variables', review_vars], ['remove table', remove_table], ['preview', preview]]
accordion = getAccordion(items, contentID='manage-small')
output = getPage(accordion, "manage", "manage")
return output
