def test_Her2_receptor_positive_breast_cancer():
diseases = normalize("Her2-receptor positive breast cancer")
assert diseases[0]['ontology_term'] == 'DOID:0060079'
assert diseases[0]['label'] == 'Her2-receptor positive breast cancer'
def test_CML():
diseases = normalize("CML")
assert diseases[0]['ontology_term'] == 'DOID:8552'
assert diseases[0]['label'] == 'chronic myeloid leukemia'
def test_stomach_cancer():
diseases = normalize("stomach cancer")
assert diseases[0]['ontology_term'] == 'DOID:10534'
assert diseases[0]['label'] == 'stomach cancer'
def test_Advanced_Solid_Tumor():
diseases = normalize("Advanced Solid Tumor")
assert len(diseases) == 0
# see https://ckb.jax.org/diseaseOntology/show?doId=10000003
""" An abnormal mass of tissue that usually does not contain cysts
def test_triple_receptor_negative_breast_cancer():
diseases = normalize("triple-receptor negative breast cancer")
assert diseases[0]['ontology_term'] == 'DOID:0060081'
assert diseases[0]['label'] == 'triple-receptor negative breast cancer'
def test_Gastrointestinal_Stromal_Tumor():
diseases = normalize("Gastrointestinal Stromal Tumor")
assert diseases[0]['ontology_term'] == 'DOID:9253'
assert diseases[0]['label'] == 'gastrointestinal stromal tumor'