def run_main(ds_xml, reference_set_xml, output_json, max_nchunks, output_dir): CU.write_alignmentset_chunks_to_file(output_json, ds_xml, reference_set_xml, max_nchunks, output_dir, "chunk_alignmentset", FileTypes.DS_ALIGN.ext) return 0
def _args_run_chunk_alignmentset(args): return CU.write_alignmentset_chunks_to_file(args.chunk_report_json, args.alignmentset, args.fasta, args.max_total_chunks, args.output_dir, "chunk_alignmentset", 'xml')
def _args_run_chunk_alignmentset(args): return CU.write_alignmentset_chunks_to_file(args.chunk_report_json, args.alignmentset, args.fasta, args.max_total_chunks, args.output_dir, "chunk_alignmentset", FileTypes.DS_ALIGN.ext)
def run_main(ds_xml, reference_set_xml, output_json, max_nchunks, output_dir): CU.write_alignmentset_chunks_to_file( output_json, ds_xml, reference_set_xml, max_nchunks, output_dir, "chunk_alignmentset", "xml" ) return 0
def run_main(ds_xml, reference_set_xml, output_json, max_nchunks, output_dir): CU.write_alignmentset_chunks_to_file(output_json, ds_xml, reference_set_xml, max_nchunks, output_dir, "chunk_alignmentset", 'xml') return 0