Command-line tool to convert track files (*.trk) to VTK polydata.
This code was adapted from prior work done by Isaiah Norton.
Assuming Slicer is built with Qt5 support enabled (which implicitly means C++11 is enabled), the following could be done:
cd TrackConverterCLI-Release
cmake -DSlicer_DIR:PATH=/path/to/Slicer-Release/Slicer-build
cmake --build . --config Release
Assuming SlicerExecutionModel and VTK are built with c++11, the following could be done:
cd TrackConverterCLI-Release
cmake \
-DSlicerExecutionModel_DIR:PATH=/path/to/SlicerExecutionModel-build \
-DVTK_DIR:PATH=/path/to/VTKv9-build \
../TrackConverterCLI
cmake --build . --config Release
USAGE:
TrackIOConverter [--returnparameterfile
<std::string>]
[--processinformationaddress
<std::string>] [--xml] [--echo]
[--deserialize <std::string>]
[--serialize <std::string>] [--]
[--version] [-h] <std::string>
<std::string>
Where:
--returnparameterfile <std::string>
Filename in which to write simple return parameters (int, float,
int-vector, etc.) as opposed to bulk return parameters (image,
geometry, transform, measurement, table).
--processinformationaddress <std::string>
Address of a structure to store process information (progress, abort,
etc.). (value: 0)
--xml
Produce xml description of command line arguments (value: 0)
--echo
Echo the command line arguments (value: 0)
--deserialize <std::string>
Restore the module's parameters that were previously archived.
--serialize <std::string>
Store the module's parameters to a file.
--, --ignore_rest
Ignores the rest of the labeled arguments following this flag.
--version
Displays version information and exits.
-h, --help
Displays usage information and exits.
<std::string>
(required) Track (*.trk) file.
<std::string>
(required) Output track model
Description: Convert a tract file to a VTK model.
Author(s): Isaiah Norton (MIT), Johan Andruejol (Kitware
Inc.)
Acknowledgements: MIT, Kitware Inc.