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protein

Protein simulation and data analysis

Dependencies

Tensorflow, cython-0.23.4, mdtraj-1.5.1, numpy-1.10.2, scipy-0.13.3, MDAnalysis-0.12.1, scikit-learn-0.17.0

Run a docker container from the image built by the Dockerfile:

docker build -t phiphy/protein . 
docker run -it --name protein -v /home/bdslss15-xpjs/simple-examples:/simple-examples -v /home/bdslss15-xpjs/protein:/protein -v /damsl/projects/MD/Simulations/bpti:/protein-data phiphy/protein

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Protein simulation and data analysis

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