CompBioSummer2015

Research in Computational Biology at Harvey Mudd College, Summer 2015

Name		Name	Last commit message	Last commit date
Latest commit History 366 Commits
TreeLifeData		TreeLifeData
Vidua		Vidua
cluster		cluster
compbio		compbio
newickData		newickData
onlineFolder		onlineFolder
rasmus		rasmus
static		static
svgFiles		svgFiles
templates		templates
testFiles		testFiles
updateFiles		updateFiles
uploadFolder		uploadFolder
xscape		xscape
.costscape.swp		.costscape.swp
.gitignore		.gitignore
COG1960.txt		COG1960.txt
CostVector.py		CostVector.py
DP.py		DP.py
DPcostscape.py		DPcostscape.py
DrawDTL.py		DrawDTL.py
DrawDTLc.pyc		DrawDTLc.pyc
Greedy.py		Greedy.py
MasterReconciliation.py		MasterReconciliation.py
README		README
README.md		README.md
RandomGenerator.py		RandomGenerator.py
ReconConversion.py		ReconConversion.py
__init__.py		__init__.py
alignlib.py		alignlib.py
app.py		app.py
calcCostscapeScore.py		calcCostscapeScore.py
cgi.py		cgi.py
commonAnalytic.py		commonAnalytic.py
costscape		costscape
costscapeNew		costscapeNew
costscapeScore.py		costscapeScore.py
cycleCheckingGraph.py		cycleCheckingGraph.py
detectCycles.py		detectCycles.py
getInput.py		getInput.py
make.sh		make.sh
newApp.py		newApp.py
newickFormatReader.py		newickFormatReader.py
newickToVis.py		newickToVis.py
orderGraph.py		orderGraph.py
plotRecon.py		plotRecon.py
reconcile.py		reconcile.py
testy.svg		testy.svg
testytesty.svg		testytesty.svg
unitScore.py		unitScore.py
vistrans		vistrans
vistrans.py		vistrans.py

alex-ozdemir/phylogenetic-reconciliation