Accompanying code for Master's Thesis written at the IT-University in Copenhagen on Neural Automatic Summarization. Focused around reimplementing, optimizing and improving the Pointer Generator from See et al. 2017. For all the experiments described in the thesis, refer to the experiments folder for corresponding configuration files. For the chunk-based approaches described in the thesis, a new repository will be published in the near future. All code has been formatted using black.

A pretrained base model can be downloaded here.
If set up correctly, evaluation on the CNNDM test set should produce the following ROUGE F1-scores:

ROUGE-1: 39.03 
ROUGE-2: 17.01 
ROUGE-L: 36.25

A pretrained base model with a vocabulary of size 20K and unknown token blocking can be download here.
Evaluation thereof on the CNNDM test should produce the following ROUGE F1-scores:

ROUGE-1: 39.26
ROUGE-2: 17.16
ROUGE-L: 36.42

NOTE: the code provided supports several experimental features that were not discussed in the thesis.

1. Quick Start
2. Setup
   1. Dependencies
   2. Data
      1. Newsroom
      2. New York Times
3. Training
4. Evaluation
5. License

• Install all dependencies according to the Dependencies section
• Download preprocessed CNNDM data here and extract it into the data folder
• Train and evaluate a base model with python train.py -cfg experiments/base.yaml --eval
• Alternatively, evaluate a pretrained model with python evaluate.py log/base.tar

All development and testing was done using PyTorch 1.0.1 and Python 3.7.3, but other versions may work fine.

pip install -r requirements.txt
python -c "import nltk; nltk.download('punkt')"

To use the official ROUGE 155 Perl implementation, download it here and extract it into the tools folder. You should now have 'ROUGE-1.5.5' folder inside your tools folder. The python wrapper pyrouge is set up to use now extracted folder. Alternatively, modify evaluate.py to use a system-wide ROUGE configuration, or evaluate using py-rouge (see Evaluation section).

The official ROUGE 155 Perl implementation, rely on libraries that may not be installed by default.
We provide instructions for Arch Linux and Ubuntu:

• On Arch Linux: sudo pacman -S perl-xml-xpath
• On Ubuntu: sudo apt-get install libxml-parser-perl

For possible tips for installation on Windows, or in general, refer to this StackOverflow post.

We provide preprocessed data for CNNDM here. The tarfile includes train, dev and test set, as well as vocabularies both with and without proper noun filtering. For easy setup, extract the tarfile into the data directory.

To manually preprocess CNNDM, refer to Abigail See's repository.
To download already preprocessed CNNDM data according to Abigail See's repository, refer to Jaffer Wilson's repository.
Once downloaded/preprocessed, you will have files in binary format. We use tsv-files instead, to which binary files can be converted, using the following script:

# note: 'bin_to_tsv.py' depends on TensorFlow which is not in requirements.txt
python tools/bin_to_tsv.py path/to/train.bin data/cnndm_abisee_train.tsv 

To create a new vocabulary file of size 50,000 from a tsv-file, use vocabulary.py:

python vocabulary.py cnndm_abisee_train.tsv cnndm_abisee.vocab 50000

Lastly, in case one wants to train using pretrained GLoVe embeddings, download them from the official GLoVe website, and convert them to a compatible format using:

python tools/glove_to_w2v.py path/to/glove.6B.100d.txt data/glove100.w2v 

The Newsroom dataset can be downloaded from its official website. For preprocessing, we supply a simple script using NLTK, which can be used as follows:

python tools/preprocess_newsroom.py release/train.jsonl.gz newsroom_train.tsv

The New York Times Annotated Corpus can be acquired through LDC. For preprocessing, we follow Paulus et al. 2017, using a script supplied by the authors. Note that this requires a local CoreNLP server and that the script takes a long time to run.

To train a model using one of the configuration files supplied, use the following command:

python train.py -cfg experiments/base.yaml
# config files can also have paramterers overwritten on the fly
python train.py -cfg experiments/base.yaml --rnn_cell lstm

To resume a model that was cancelled/interrupted use:

python train.py --resume_from log/model.tar
# optionally, some parameters can be changed when resuming
python train.py --resume_from log/model.tar --batch_size 32

To resume training a model that has trained without coverage, while also converting it to now use coverage, use:

# note that this is only tested with default attention configuration
python train.py --resume_from log/model.tar --convert_to_coverage

See train.py and config.py for all possible options.

To evaluate a model on some test set using official ROUGE 155 Perl implementation:

python evaluate.py log/model.tar path/to/test_set.tsv

To evaluate using py-rouge, a Python reimplementation with less dependencies, use:

# note that py-rouge does not produce rouge scores identical to the perl implementation
python evaluate.py log/model.tar path/to/test_set.tsv --use_python

We support many different test-time parameters that can be given to evaluate. Refer to config.py and possibly beam_search.py for all options. Some example uses of said options follow:

python evaluate.py log/model.tar path/to/test_set.tsv --length_normalize wu --length_normalize_alpha 1.0
python evaluate.py log/model.tar path/to/test_set.tsv --beam_size 8
python evaluate.py log/model.tar path/to/test_set.tsv --block_ngram_repeat 3
python evaluate.py log/model.tar path/to/test_set.tsv --block_unknown

# save summaries and configuration to a json-file
python evaluate.py log/model.tar path/to/test_set.tsv --save

Note that util.py can be used to easily inspect the attributes of a model (see module documentation for further information).

NOTE: preprocess_nyt.py, plot.py and jsonl.py all have separate licenses. See each file's header for specifics.
All other code is distributed under MIT:

MIT License

Copyright (c) 2019 Emil Lynegaard

Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions:

The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.

THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.