A collection of Python tools for filtering and visualizing Next Generation Sequencing reads.

Runs under Python 2.7, 3.5, and 3.6. Change log

You should be able to install via

$ pip install dark-matter

Some additional information is available for Linux, OS X, and Windows.

If you are using dark matter in an iPython Notebook, you should install the requirements in requirements-ipynb.txt.

If you are using dark matter as a developer, you should install the requirements in requirements-dev.txt.