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pytorch_generate_unitsegments.py
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pytorch_generate_unitsegments.py
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# the example script to generate the unit segmentation visualization using pyTorch
# Bolei Zhou
import torch
from torch.autograd import Variable as V
import torchvision.models as models
from torchvision import transforms as trn
from torch.nn import functional as F
import os
import pdb
import numpy as np
from scipy.misc import imresize as imresize
import cv2
from PIL import Image
from dataset import Dataset
import torch.utils.data as data
import torchvision.models as models
# visualization setup
img_size = (224, 224) # input image size
segment_size = (120,120) # the unit segmentaiton size
num_top = 12 # how many top activated images to extract
margin = 3 # pixels between two segments
threshold_scale = 0.2 # the scale used to segment the feature map. Smaller the segmentation will be tighter.
flag_crop = 1 # whether to generate tight crop for the unit visualiation.
flag_classspecific = 1 # whether to generate the class specific unit for each category (only works for network with global average pooling at the end)
# dataset setup
batch_size = 64
num_workers = 6
# load the pre-trained weights
id_model = 1
if id_model == 1:
model_name = 'wideresnet_places365'
model_file = 'whole_wideresnet18_places365.pth.tar' # download it from https://github.com/CSAILVision/places365/blob/master/run_placesCNN_unified.py
if not os.path.exists(model_file):
os.system('wget http://places2.csail.mit.edu/models_places365/' + model_file)
os.system('wget https://raw.githubusercontent.com/csailvision/places365/master/wideresnet.py')
class_file = 'categories_places365.txt'
if not os.path.exists(class_file):
synset_url = 'https://raw.githubusercontent.com/csailvision/places365/master/categories_places365.txt'
os.system('wget ' + synset_url)
classes = list()
with open(class_file) as f:
for line in f:
classes.append(line.strip().split(' ')[0][3:])
classes = tuple(classes)
model = torch.load(model_file)
features_names = ['layer4']
elif id_model == 2:
model_name = 'resnet18_imagenet'
model = models.resnet18(pretrained=True)
features_names = ['layer4']
elif id_model == 3:
model_name = 'squeezenet_imagenet'
model = models.squeezenet1_0(pretrained=True)
features_names = ['features']
model.eval()
model.cuda()
# image datasest to be processed
name_dataset = 'sun+imagenetval'
root_image = 'data/images'
with open('data/images/imagelist.txt') as f:
lines = f.readlines()
imglist = []
for line in lines:
line = line.rstrip()
imglist.append(root_image + '/' + line)
features_blobs = []
def hook_feature(module, input, output):
# hook the feature extractor
features_blobs.append(np.squeeze(output.data.cpu().numpy()))
for name in features_names:
model._modules.get(name).register_forward_hook(hook_feature)
# image transformer
tf = trn.Compose([
trn.Scale(img_size),
trn.ToTensor(),
trn.Normalize([0.485, 0.456, 0.406], [0.229, 0.224, 0.225])
])
dataset = Dataset(imglist, tf)
loader = data.DataLoader(
dataset,
batch_size=batch_size,
num_workers=num_workers,
shuffle=False)
# extract the max value activaiton for each image
imglist_results = []
maxfeatures = [None] * len(features_names)
num_batches = len(dataset) / batch_size
for batch_idx, (input, paths) in enumerate(loader):
del features_blobs[:]
print('%d / %d' % (batch_idx+1, num_batches))
input = input.cuda()
input_var = V(input, volatile=True)
logit = model.forward(input_var)
imglist_results = imglist_results + list(paths)
if maxfeatures[0] is None:
# initialize the feature variable
for i, feat_batch in enumerate(features_blobs):
size_features = (len(dataset), feat_batch.shape[1])
maxfeatures[i] = np.zeros(size_features)
start_idx = batch_idx*batch_size
end_idx = min((batch_idx+1)*batch_size, len(dataset))
for i, feat_batch in enumerate(features_blobs):
maxfeatures[i][start_idx:end_idx] = np.max(np.max(feat_batch,3),2)
# generate the top activated images
output_folder = 'result_segments/%s' % model_name
if not os.path.exists(output_folder):
os.makedirs(output_folder + '/image')
# output the html first
for layerID, layer in enumerate(features_names):
file_html = os.path.join(output_folder, layer + '.html')
with open(file_html, 'w') as f:
num_units = maxfeatures[layerID].shape[1]
lines_units = ['%s-unit%03d.jpg' % (layer, unitID) for unitID in range(num_units)]
lines_units = ['unit%03d<br><img src="image/%s">'%(unitID, lines_units[unitID]) for unitID in range(num_units)]
f.write('\n<br>'.join(lines_units))
# it contains the cropped regions
if flag_crop == 1:
file_html_crop = os.path.join(output_folder, layer + '_crop.html')
with open(file_html_crop, 'w') as f:
num_units = maxfeatures[layerID].shape[1]
lines_units = ['%s-unit%03d_crop.jpg' % (layer, unitID) for unitID in range(num_units)]
lines_units = ['unit%03d<br><img src="image/%s">'%(unitID, lines_units[unitID]) for unitID in range(num_units)]
f.write('\n<br>'.join(lines_units))
if flag_classspecific == 1:
num_topunit_class = 3
layer_lastconv = features_names[-1]
# get the softmax weight
params = list(model.parameters())
weight_softmax = np.squeeze(params[-2].data.cpu().numpy())
file_html = os.path.join(output_folder, 'class_specific_unit.html')
output_lines = []
for classID in range(len(classes)):
line = '<h2>%s</h2>' % classes[classID]
idx_units_sorted = np.argsort(np.squeeze(weight_softmax[classID]))[::-1]
for sortID in range(num_topunit_class):
unitID = idx_units_sorted[sortID]
weight_unit = weight_softmax[classID][unitID]
line += 'weight=%.3f %s<br>' % (weight_unit, lines_units[unitID])
line = '<p>%s</p>' % line
output_lines.append(line)
with open(file_html, 'w') as f:
f.write('\n'.join(output_lines))
# generate the unit visualization
for layerID, layer in enumerate(features_names):
num_units = maxfeatures[layerID].shape[1]
imglist_sorted = []
# load the top actiatied image list into one list
for unitID in range(num_units):
activations_unit = np.squeeze(maxfeatures[layerID][:, unitID])
idx_sorted = np.argsort(activations_unit)[::-1]
imglist_sorted += [imglist[item] for item in idx_sorted[:num_top]]
# data loader for the top activated images
loader_top = data.DataLoader(
Dataset(imglist_sorted, tf),
batch_size=num_top,
num_workers=num_workers,
shuffle=False)
for unitID, (input, paths) in enumerate(loader_top):
del features_blobs[:]
print('%d / %d' % (unitID+1, num_units))
input = input.cuda()
input_var = V(input, volatile=True)
logit = model.forward(input_var)
feature_maps = features_blobs[layerID]
images_input = input.cpu().numpy()
max_value = 0
output_unit = []
for i in range(num_top):
feature_map = feature_maps[i][unitID]
if max_value == 0:
max_value = np.max(feature_map)
feature_map = feature_map / max_value
mask = cv2.resize(feature_map, segment_size)
mask[mask < threshold_scale] = 0.0 # binarize the mask
mask[mask > threshold_scale] = 1.0
img = cv2.imread(paths[i])
img = cv2.resize(img, segment_size)
img = cv2.normalize(img.astype('float'), None, 0.0, 1.0, cv2.NORM_MINMAX)
img_mask = np.multiply(img, mask[:,:, np.newaxis])
img_mask = np.uint8(img_mask * 255)
output_unit.append(img_mask)
output_unit.append(np.uint8(np.ones((segment_size[0],margin,3))*255))
montage_unit = np.concatenate(output_unit, axis=1)
cv2.imwrite(os.path.join(output_folder, 'image', '%s-unit%03d.jpg'%(layer, unitID)), montage_unit)
if flag_crop == 1:
# load the library to crop image
import tightcrop
montage_unit_crop = tightcrop.crop_tiled_image(montage_unit, margin)
cv2.imwrite(os.path.join(output_folder, 'image', '%s-unit%03d_crop.jpg'%(layer, unitID)), montage_unit_crop)
print('done check results in ' + output_folder)