xBrowse

xBrowse is a software package for working with next generation sequencing data, specifically in the context of studying rare genetic diseases.

This package contains the analysis code that powers the xBrowse website, but we welcome anyone wishing to set up their own private instance of xBrowse.

Please Note: This package is in active development, and the API is extremely unstable. We suggest you contact us if you want to build on this repo.

Installation Instructions

xBrowse local install: deploy/mac_osx/README.md
Phenotips install instructions that enable Phenotips to be used to enter HPO-based phenotypes from within xBrowse.

Name		Name	Last commit message	Last commit date
Latest commit History 986 Commits
deploy		deploy
docs		docs
scripts		scripts
test		test
xbrowse		xbrowse
xbrowse_server		xbrowse_server
.gitignore		.gitignore
LICENSE.txt		LICENSE.txt
README.md		README.md
add_new_project_by_chromosomes.py		add_new_project_by_chromosomes.py
add_new_project_directory.py		add_new_project_directory.py
add_new_project_from_vcf_and_ped.py		add_new_project_from_vcf_and_ped.py
functional_tests.py		functional_tests.py
manage.py		manage.py
server_requirements.txt		server_requirements.txt
server_requirements_prereqs.txt		server_requirements_prereqs.txt
settings.py		settings.py
setup.py		setup.py
shell.py		shell.py
tasks.py		tasks.py
wsgi.py		wsgi.py

License

burkesquires/xbrowse

Folders and files

Latest commit

History

Repository files navigation

xBrowse

Installation Instructions

About

Resources

License

Stars

Watchers

Forks

Languages