m-oryzae-polya

Genome wide poly-A site identitication and analysis in Magnaporthe oryzae using 3'T fill protocol

Name		Name	Last commit message	Last commit date
Latest commit History 163 Commits
data		data
doc		doc
.project		.project
.pydevproject		.pydevproject
3UTR_length.py		3UTR_length.py
FDR.R		FDR.R
README.md		README.md
TODO		TODO
adaptor.fa		adaptor.fa
apa_levels.py		apa_levels.py
assign.py		assign.py
correlation.R		correlation.R
correlation.R~		correlation.R~
diff_expr.R		diff_expr.R
diff_expr_old.R		diff_expr_old.R
diff_polyA.R		diff_polyA.R
draw_domains.py		draw_domains.py
fasta_extract.py		fasta_extract.py
fasta_extract_trim.py		fasta_extract_trim.py
fasta_split.py		fasta_split.py
fasta_squash.py		fasta_squash.py
filter.py		filter.py
fisher_test.R		fisher_test.R
get_small_rna.py		get_small_rna.py
gprofiler.R		gprofiler.R
illumina_adapters.fa		illumina_adapters.fa
iprscan_soappy.py		iprscan_soappy.py
iptoowl.py		iptoowl.py
maf_order.py		maf_order.py
norm.py		norm.py
notdiff_polyA.R		notdiff_polyA.R
old_diff_polyA.R		old_diff_polyA.R
pair_end_avg.py		pair_end_avg.py
parse_blast_xml.py		parse_blast_xml.py
parse_blast_xml.py~		parse_blast_xml.py~
pipeline.sh		pipeline.sh
plot_fold.R		plot_fold.R
plot_go.py		plot_go.py
plot_kegg.py		plot_kegg.py
polyA_distance.py		polyA_distance.py
polyA_distribution.py		polyA_distribution.py
polyA_extract.py		polyA_extract.py
polyA_extract_NEW.py		polyA_extract_NEW.py
polyA_extract_not.py		polyA_extract_not.py
polyA_localization.py		polyA_localization.py
polyA_localization_old.py		polyA_localization_old.py
polyA_nucleotide.py		polyA_nucleotide.py
polyA_usage_ratio.py		polyA_usage_ratio.py
query_fasta.xml		query_fasta.xml
query_ortho.xml		query_ortho.xml
rfam_scan.pl		rfam_scan.pl
scatter.R		scatter.R

hjanime/m-oryzae-polya