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Useful utils for molecular dynamics and molecular electronics calculations

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The following environmental variables needs to be set:

  • UTILS_DIR
  • BABEL_EXE (openbabel executable)
  • LAMMPS_EXE (lammps executable)

For ase you need to set

  • SIESTA_COMMAND (SIESTA executable)
  • SIESTA_PP_PATH (Pseudopotentials for SIESTA)
  • DFTB_COMMAND (DFTB executable)
  • DFTB_PREFIX (potential files for DFTB)

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