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Genome Utilities

This module provides basic bioinformatic tools for KBase users.

Examples of tools that will be developed in this module:

  1. Blast a protein sequence against a genome

  2. Generate GeneOntology annotation for a protein sequence, through InterproSCAN.

  3. All-aganist-all sequence comparison between two genomes

  4. Functional comparison between two genomes

Testing

  1. provide user name and password in test/test.cfg

  2. login as kbasetest

  3. make test

About

Exposes core KBase genome and feature utility methods, such as running Blast against a genome

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