example running script for MMTK simulations (PIMC/PIMD)
This is an asymmetric top density matrix calculator which is based on Fortran code.
make clean
make
To optimize the calculation of density matrix, we run submit_the.sh script on server with qsub for a fixed theta value 181 times parallezation calculation as the range of theta angle is (0,180]:
for c in {0..180}; do qsub -v "ithe=$c" submit_the.sh; done
then, 181 files will be generated, we can use the compile.x script to combine all the files to get the final density matrix file:
./compile.x
final density matrix files are named as rho.den_rho, rho.den_eng, rho.den_esq
- q-TIP4P
- mb-Pol
- dipole-dipole interaction
- No_Pol
- ...
In the runnning script test-h2o-local.py we can modify different parameters we need in our simulations.