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Occiput - Tomographic Vision

Tomographic reconstruction - 3D and 4D PET, SPECT, CT, MRI.

Installation

Linux, MacOsX, Windows

There are two ways to install under Linux and MacOsX and Windows:

  1. If you have pip installed:

pip install occiput

  1. Download source files; uncompress; at the command line, cd to the source folder and run:

python setup.py build install

Getting started

To get started, install IPython and launch the scripts in the /notebooks folder. The PET reconstruction requires a CUDA-compatible GPU - but then it's really fast! Thanks to the IPython and Jupyter magic and to support from Amazon AWS, it is also possible to try occiput.io from the browser using GPUs in the cloud: http://www.occiput.io/try/

Website

occiput.io home page.

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Tomographic vision

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  • Python 72.0%
  • Jupyter Notebook 28.0%