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the source addaptive to the latest python module for the paper Nuclear segmentation in microscope cell images:a hand-segmented dataset and comparison of algorithms

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目录说明:
data:数据集
自行将images文件夹添加到data目录下
source:源码
Coelho2009_ISBI_NuclearSegmentation:
论文A hand-segmented dataset and comparison of algorithms by Luis Pedro Coelho,Aabid Shariff and Robert F.Murphy.DOI相关源码,该源码可以运行通与最新jug兼容.

但主要还是通过以下方法对源码进行跟踪.

环境准备:
在机器上安装好python,pip包管理工具

在该根目录下直接安装所需的软件依赖包:
$sudo apt-get install libfreeimage-dev #解决FreeImage报错, $sudo apt-get install libmagick++-dev
主要是应为缺少freeimage开发库.
使用如下命令安装相关python依赖包:
pip install -r requirements.txt (#numpy cast bug已解决)

代码运行:
进入到sources目录后,
运行以下语句
python jug.py execute #执行计算任务
运行以下语句
python jug.py status #查看任务执行情况
这里注意的是没有使用最新jug,二是使用juglib里面的旧版本的jug

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the source addaptive to the latest python module for the paper Nuclear segmentation in microscope cell images:a hand-segmented dataset and comparison of algorithms

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