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Predicting and validating causal effects from microarraydata.

Install

Warning: work in progress, not yet fully installable!

Run install.sh to setup all required R and Python-2.7 packages, download all data and preprocess it.

Organization

  • code -- package with prediction and validation code
  • data -- download and preprocess data
  • experiments -- scripts to compute predictions from the data and compare against multiple groundtruths
  • test -- contains PyTest tests

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Methods for predicting and validating causal effects in gene expression data.

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