This repository contains practical excercises to learn image analysis using ImageJ/Fiji with a strong focus on biological fluorescence microscopy data.

If you are using this teaching material, it would be nice of you to cite it:

• Christian Tischer & Aliaksandr Halavatyi. (2019). Bioimage Analysis Teaching Material for ImageJ. Zenodo. http://doi.org/10.5281/zenodo.2633701

• Install Fiji: http://fiji.sc/
• Download this repository: https://github.com/tischi/imagej-courses/archive/master.zip
• Follow instructions given in the files within the ../practicals folder. Please note that the material in this folder is not always self-contained, but sometimes needs explanations by a teacher.

• https://www.edx.org/course/image-processing-and-analysis-for-life-scientists
• http://www.imaging-git.com/olympus-website-bioimage-data-analysis
• https://legacy.gitbook.com/book/petebankhead/imagej-intro/details