Name		Name	Last commit message	Last commit date
Latest commit History 7 Commits
config/visualizations		config/visualizations
contrib		contrib
cron		cron
database		database
display_applications		display_applications
doc		doc
eggs		eggs
external_service_types		external_service_types
lib		lib
locale		locale
openid		openid
scripts		scripts
static		static
templates		templates
test-data		test-data
test		test
tool-data		tool-data
tools		tools
LICENSE.txt		LICENSE.txt
README.md		README.md
README.txt		README.txt
buildbot_setup.sh		buildbot_setup.sh
create_db.sh		create_db.sh
data_manager_conf.xml		data_manager_conf.xml
data_manager_conf.xml.sample		data_manager_conf.xml.sample
datatypes_conf.xml		datatypes_conf.xml
datatypes_conf.xml.sample		datatypes_conf.xml.sample
demo_sequencer_wsgi.ini.sample		demo_sequencer_wsgi.ini.sample
dist-eggs.ini		dist-eggs.ini
distributed_object_store_conf.xml.sample		distributed_object_store_conf.xml.sample
eggs.ini		eggs.ini
external_service_types_conf.xml		external_service_types_conf.xml
external_service_types_conf.xml.sample		external_service_types_conf.xml.sample
extract_dataset_parts.sh		extract_dataset_parts.sh
install_and_test_tool_shed_repositories.sh		install_and_test_tool_shed_repositories.sh
integrated_tool_panel.xml		integrated_tool_panel.xml
integrated_tool_panel.xml~		integrated_tool_panel.xml~
job_conf.xml.sample_advanced		job_conf.xml.sample_advanced
job_conf.xml.sample_basic		job_conf.xml.sample_basic
manage_db.sh		manage_db.sh
manage_tools.sh		manage_tools.sh
migrated_tools_conf.xml		migrated_tools_conf.xml
migrated_tools_conf.xml.sample		migrated_tools_conf.xml.sample
openid_conf.xml		openid_conf.xml
openid_conf.xml.sample		openid_conf.xml.sample
reports_wsgi.ini		reports_wsgi.ini
reports_wsgi.ini.sample		reports_wsgi.ini.sample
run.sh		run.sh
run_demo_sequencer.sh		run_demo_sequencer.sh
run_functional_tests.sh		run_functional_tests.sh
run_galaxy_listener.sh		run_galaxy_listener.sh
run_reports.sh		run_reports.sh
run_tool_shed.sh		run_tool_shed.sh
run_tool_shed_functional_tests.sh		run_tool_shed_functional_tests.sh
run_unit_tests.sh		run_unit_tests.sh
set_metadata.sh		set_metadata.sh
setup_rabbitmq.sh		setup_rabbitmq.sh
shed_data_manager_conf.xml		shed_data_manager_conf.xml
shed_data_manager_conf.xml.sample		shed_data_manager_conf.xml.sample
shed_tool_conf.xml		shed_tool_conf.xml
shed_tool_conf.xml.sample		shed_tool_conf.xml.sample
shed_tool_data_table_conf.xml		shed_tool_data_table_conf.xml
shed_tool_data_table_conf.xml.sample		shed_tool_data_table_conf.xml.sample
tool_conf.xml		tool_conf.xml
tool_conf.xml.main		tool_conf.xml.main
tool_conf.xml.original		tool_conf.xml.original
tool_conf.xml.sample		tool_conf.xml.sample
tool_conf.xml~		tool_conf.xml~
tool_data_table_conf.xml		tool_data_table_conf.xml
tool_data_table_conf.xml.oldlocstyle		tool_data_table_conf.xml.oldlocstyle
tool_data_table_conf.xml.sample		tool_data_table_conf.xml.sample
tool_list.py		tool_list.py
tool_shed_wsgi.ini.sample		tool_shed_wsgi.ini.sample
tool_sheds_conf.xml		tool_sheds_conf.xml
tool_sheds_conf.xml.sample		tool_sheds_conf.xml.sample
universe_wsgi.ini		universe_wsgi.ini
universe_wsgi.ini.sample		universe_wsgi.ini.sample
universe_wsgi.ini~		universe_wsgi.ini~

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galaxy-pipelines

Galaxy pipelines

Files that I modified include:

galaxy-pipelines/tools/small_rna_pipelines/

universe_wsgi.ini

tool_conf.xml

License

yfu/galaxy-pipelines

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