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bae.py
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bae.py
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from __future__ import print_function, nested_scopes, unicode_literals, division
import numpy as np
# import matplotlib.pyplot as plt
import sys
# from scipy.sparse import dok_matrix,coo_matrix,csr_matrix
# from random import choice, shuffle
import timeit
import itertools
sys.path.append('../liblinear/python')
import liblinearutil
if sys.version_info < (3, 5):
import cPickle
else:
import pickle as cPickle
def read_cifar(path='../cifar-10-batches-py/'):
""" load cifar images
"""
files = ['data_batch_1',
'data_batch_2',
'data_batch_3',
'data_batch_4',
'data_batch_5',
'test_batch',]
images = []
labels = []
for file in files:
with open(path + file, 'rb') as fo:
if sys.version_info < (3, 5):
dict=cPickle.load(fo)
else:
dict=cPickle.load(fo, encoding='bytes')
images.append(dict[b'data'].reshape(-1, 3, 32, 32).transpose(0,2,3,1))
labels.append(np.asarray(dict[b'labels']).reshape(-1, 1))
images = np.vstack(images)
labels = np.vstack(labels).reshape(-1)
return (images, labels)
def load_gist():
""" load gist features
"""
with open('../triplet_hashing-master/features', 'rb') as fo:
features=cPickle.load(fo)
return features
def h_step(features, codes, verbose=True):
N, D = features.shape
models = []
for (y, i) in zip(codes.T, range(codes.shape[1])):
t_start = timeit.default_timer()
models.append(liblinearutil.train(y.tolist(), features.tolist(), str('-s 0 -c 4 -q')))
t_end = timeit.default_timer()
if verbose:
print('[H] {:3d}th bit, {:.4f} seconds elapsed'.format(i, t_end-t_start))
return models
def f_step(features, models, verbose=True):
# X = features
Z = []
for (m, i) in zip(models, range(len(models))):
t_start = timeit.default_timer()
p_label, p_acc, p_val = liblinearutil.predict([0]*features.shape[0], features.tolist(), m , str('-q'))
Z.append(p_label)
t_end = timeit.default_timer()
if verbose:
print('[F] {:3d}th bit, {:.4f} seconds elapsed'.format(i, t_end-t_start))
Z = np.vstack(Z).transpose()
# np.linalg.pinv(Z).dot(X).shape
return (np.linalg.pinv(Z).dot(features), Z)
def generate_enums(L):
enums = []
for i in range(L+1):
for subset in itertools.combinations(range(L),i):
subset=np.array(subset,dtype=int)
enum=np.zeros(L,dtype=int)
enum[subset]=1
enums.append(enum)
enums = np.vstack(enums)
return enums
def z_step(features, models, A, old_Z, mu):
assert old_Z.shape[1] == len(models)
t_start = timeit.default_timer()
L = old_Z.shape[1]
enums = generate_enums(L)
loss = []
for enum in enums:
loss.append(np.linalg.norm(features-enum.dot(A), axis=1) ** 2 + mu * np.linalg.norm(old_Z-enum, axis=1) ** 2)
loss = np.vstack(loss)
min_idx = np.argmin(loss, axis=0)
# print(sum(np.min(loss, axis=0)))
t_end = timeit.default_timer()
print('[Z] {:.4f} seconds elapsed'.format(t_end-t_start))
return (enums[min_idx], sum(np.min(loss, axis=0)))
def test_recon(features, models, A):
_, Z = f_step(features, models, verbose=False)
recon_error = sum(np.linalg.norm(features-Z.dot(A), axis=1) ** 2) / features.shape[0]
return recon_error
def hash(features, num_train_samples=58000, L=8):
bits = []
for i in range(L):
start = timeit.default_timer()
m = liblinearutil.load_model('models/tr{0:05d}-L{1:02d}-b{2:02d}.model'.format(num_train_samples, L, i))
p_label, p_acc, p_val = liblinearutil.predict([0]*features.shape[0], features.tolist(), m , str('-q'))
bits.append(p_label)
end = timeit.default_timer()
print('[HASH] {0:3d}th bit hashed. {1:.4f} seconds elapsed'.format(i, end-start))
start = timeit.default_timer()
bits = np.vstack(bits).transpose().astype(np.int)
bits[np.nonzero(bits==0)] = -1
with open('hash/tr{0:05d}-L{1:02d}'.format(num_train_samples, L), 'wb') as fo:
cPickle.dump(bits, fo)
end = timeit.default_timer()
print('[HASH] Hash codes saved. {0:.4f} seconds elapsed'.format(end-start))
return
def calc_mean_ap(base_set_labels, num_test, num_train_samples=58000, L=8):
with open('hash/tr{0:05d}-L{1:02d}'.format(num_train_samples, L), 'rb') as fo:
codes = cPickle.load(fo)
assert codes.shape[0]==base_set_labels.shape[0]
test_labels = base_set_labels[-num_test:]
distances = -codes[-num_test:].dot(codes.transpose())
min_idx = np.argsort(distances)
mean_ap = 0.0
for i in range(num_test):
counter = 0
ap = 0.0
for j in range(500):
if base_set_labels[min_idx[i,j]]==test_labels[i]:
counter = counter + 1
ap = ap + counter / (j + 1.0)
if counter == 0:
counter = 1
ap = ap / counter
mean_ap = mean_ap + ap
mean_ap = mean_ap / num_test
return mean_ap
def calc_precision_at_k(base_set_labels, num_test, num_train_samples=58000, L=8, K=50):
with open('hash/tr{0:05d}-L{1:02d}'.format(num_train_samples, L), 'rb') as fo:
codes = cPickle.load(fo)
assert codes.shape[0]==base_set_labels.shape[0]
test_labels = base_set_labels[-num_test:]
distances = -codes[-num_test:].dot(codes.transpose())
min_idx = np.argsort(distances)
p = 0.0
for i in range(num_test):
counter = 0
for j in range(K):
if base_set_labels[min_idx[i,j]]==test_labels[i]:
counter = counter + 1
p = p + counter / (K * 1.0)
p = p / num_test
return p
if __name__ == '__main__':
(color_images, labels) = read_cifar('../data/cifar-10-batches-py/')
# mu = np.array([0,0,0,0,.0005,.0005,.0005,.0005,.001,.001,.001,.002,.002,.005,.005,.01,.01,.05,.05,.2])
mu = np.array([0.0005, 0.001, 0.01, 0.02, 0.05, 0.1])
features = load_gist()
num_train = 1000
num_test = 2000
train_features = features[:num_train]
test_features = features[-num_test:]
L = 12
codes = np.random.randint(2, size=(train_features.shape[0], L))
for i in range(mu.shape[0]):
print('----------')
print('[ITER] {:3d} mu = {:.4f}'.format(i, mu[i]))
t_start = timeit.default_timer()
models = h_step(train_features, codes, verbose=True)
(A, old_Z) = f_step(train_features, models, verbose=True)
(codes, loss) = z_step(train_features, models, A, old_Z, mu[i])
t_end = timeit.default_timer()
recon_error = np.linalg.norm(train_features-codes.dot(A), axis=1) ** 2
print('[ITER] {:3d} train set recon error: {:.4f}'.format(i, sum(recon_error)/train_features.shape[0]))
print('[ITER] {:3d} test set recon error: {:.4f}'.format(i, test_recon(test_features, models, A)))
print('[ITER] {:3d} {:.4f} seconds elapsed'.format(i, t_end-t_start))
# print('[ITER] {:3d} loss: {:.4f}'.format(i, loss))
for (m,i) in zip(models, range(len(models))):
liblinearutil.save_model('models/tr{0:05d}-L{1:02d}-b{2:02d}.model'.format(train_features.shape[0], L, i), m)
hash(features, num_train, L)
print(calc_mean_ap(labels, num_test, num_train, L))
print(calc_precision_at_k(labels, num_test, num_train, L, 50))