if __name__ == '__main__':
'''
aligment = [
"XTQNPQWLWQEVLQEQQLSRPTYETTT",
"MTQNPQWLWQEVLTKLRPTYET",
#"MTQNPQWLLSRPTYET",
"MTQNPQWLWQEVLTKLERPTYET",
"MTQNPQWLWQEVLTKLEQQLSRPTYET",
"MTQNPQWLWQEVLTKLEQQSRPTYET",
"MTQNPQWLWQQLSRPTYET",
"CTQNPQWLWQEVLQEQQLSRPTYETTT"
]
'''
files = Files()
files.open("input.fasta")
nj = NeighborJoining(files.getLabels(), files.getSequencias())
#nj.execute()
#print(files.getSequencias())
#print(files.getLabels())
saga = Saga(population_size=20, num_generations=100)
print("Parameters:")
print("Polulation size = 20")
print("um generations = 100")
print(files.getSequencias())
print()
saga.execute(files.getSequencias())
print("Fim execução!!")
#!/usr/bin/env python3
# -*- coding: utf-8 -*
from NeighbourJoining import NeighbourJoining
from Files import Files
if __name__ == '__main__':
files = Files()
files.open("arq.fasta")
nj = NeighbourJoining(files.getLabels(), files.getSequencias())
nj.execute()
print("Fim de execução!!")
