Beispiel #1
0
	def __init__(self, hostname, dbname, schema, type, output, orgn, go_set_fname):
		GO_graphxml.__init__(self, hostname, dbname, schema, type, output, orgn)
		self.go_set_file = csv.reader(file(go_set_fname), delimiter='\t')
		self.go_id_set = Set()
Beispiel #2
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	def dstruc_loadin(self):
		GO_graphxml.dstruc_loadin(self)
		for row in self.go_set_file:
			self.go_id_set.add(row[0])
Beispiel #3
0
	def __init__(self, hostname, dbname, schema, type, dir, output, visualize):
		GO_graphxml.__init__(self, hostname, dbname, schema, type, output)
		self.dir = dir
		self.visualize = visualize