simulationContext = SimulationContext() evaluator = Evaluator() evaluator.SetSimulationContext(simulationContext) simulationContext.SetEvaluator(evaluator) '''Parameters Model Adaptor''' modelAdaptor = ModelAdaptor() modelAdaptor.SetSimulationContext(simulationContext) modelAdaptor.SetEvaluator(evaluator) xmlnetpathGeneric = os.path.join(wdir, xmlNetGeneric) xmlboundpathGeneric = os.path.join(wdir, xmlBoundGeneric) xsdnetpath = os.path.join(xdir, xsdNet) xsdboundpath = os.path.join(xdir, xsdBound) print wdir simulationContext.ReadFromXML(xmlboundpathGeneric, xsdboundpath) '''Creating NetworkGraph Object From its XML''' networkGraph = NetworkGraph() networkGraph.ReadFromXML(xmlnetpathGeneric, xsdnetpath) modelAdaptor.Idpat = networkGraph.PatientId netPost = modelAdaptor.Idpat + '_' + xmlNetGeneric boundPost = modelAdaptor.Idpat + '_BC_' + xmlNetGeneric xmlnetpath = os.path.join(wdir, netPost) xmlboundpath = os.path.join(wdir, boundPost) #starting customization modelAdaptor.AdaptingParameters(xmlboundpathGeneric, xmlboundpath) '''NetworkGraph Model Adaptor''' modelAdaptor.SetNetworkGraph(networkGraph) evaluator.SetNetworkGraph(networkGraph) modelAdaptor.AdaptingModel(xmlnetpathGeneric, xmlnetpath)
simulationContext.SetEvaluator(evaluator)
'''Parameters Model Adaptor'''
modelAdaptor = ModelAdaptor()
modelAdaptor.SetSimulationContext(simulationContext)
modelAdaptor.SetEvaluator(evaluator)
xmlnetpathGeneric = os.path.join(wdir, xmlNetGeneric)
xmlboundpathGeneric = os.path.join(wdir, xmlBoundGeneric)
xsdnetpath = os.path.join(xdir, xsdNet)
xsdboundpath = os.path.join(xdir, xsdBound)
print wdir
simulationContext.ReadFromXML(xmlboundpathGeneric, xsdboundpath)
'''Creating NetworkGraph Object From its XML'''
networkGraph = NetworkGraph()
networkGraph.ReadFromXML(xmlnetpathGeneric, xsdnetpath)
modelAdaptor.Idpat=networkGraph.PatientId
netPost = modelAdaptor.Idpat+'_'+xmlNetGeneric
boundPost = modelAdaptor.Idpat+'_BC_'+xmlNetGeneric
xmlnetpath = os.path.join(wdir, netPost)
xmlboundpath = os.path.join(wdir, boundPost)
#starting customization
modelAdaptor.AdaptingParameters(xmlboundpathGeneric,xmlboundpath)
'''NetworkGraph Model Adaptor'''
modelAdaptor.SetNetworkGraph(networkGraph)
evaluator.SetNetworkGraph(networkGraph)
modelAdaptor.AdaptingModel(xmlnetpathGeneric,xmlnetpath)
