masterNet = launchVisionToRunNetworkAsApplication(splash=splash)
import os
masterNet.filename = os.path.abspath(__file__)
from traceback import print_exc
## loading libraries ##
from AutoDockTools.VisionInterface.Adt import Adt
from WebServices.VisionInterface.WSNodes import wslib
from Vision.StandardNodes import stdlib
try:
masterNet
except (NameError, AttributeError): # we run the network outside Vision
from NetworkEditor.net import Network
masterNet = Network()
masterNet.getEditor().addLibraryInstance(Adt,
"AutoDockTools.VisionInterface.Adt",
"Adt")
masterNet.getEditor().addLibraryInstance(
wslib, "WebServices.VisionInterface.WSNodes", "wslib")
masterNet.getEditor().addLibraryInstance(stdlib, "Vision.StandardNodes",
"stdlib")
from WebServices.VisionInterface.WSNodes import addOpalServerAsCategory
try:
addOpalServerAsCategory("http://ws.nbcr.net/opal2", replace=False)
except:
pass
try:
addOpalServerAsCategory("http://kryptonite.nbcr.net/opal2", replace=False)
splash = True
masterNet = launchVisionToRunNetworkAsApplication(splash=splash)
import os
masterNet.filename = os.path.abspath(__file__)
from traceback import print_exc
## loading libraries ##
from Vision.matplotlibNodes import matplotliblib
from Vision.StandardNodes import stdlib
from DejaVu.VisionInterface.DejaVuNodes import vizlib
try:
masterNet
except (NameError, AttributeError): # we run the network outside Vision
from NetworkEditor.net import Network
masterNet = Network()
masterNet.getEditor().addLibraryInstance(matplotliblib,"Vision.matplotlibNodes", "matplotliblib")
masterNet.getEditor().addLibraryInstance(stdlib,"Vision.StandardNodes", "stdlib")
masterNet.getEditor().addLibraryInstance(vizlib,"DejaVu.VisionInterface.DejaVuNodes", "vizlib")
try:
## saving node Histogram ##
from Vision.matplotlibNodes import HistogramNE
Histogram_0 = HistogramNE(constrkw={}, name='Histogram', library=matplotliblib)
masterNet.addNode(Histogram_0,108,243)
Histogram_0.inputPortByName['bins'].widget.set(50, run=False)
Histogram_0.inputPortByName['normed'].widget.set(1, run=False)
Histogram_0.inputPortByName['patch_antialiased'].widget.set(1, run=False)
Histogram_0.inputPortByName['patch_linewidth'].widget.set(1, run=False)
Histogram_0.inputPortByName['patch_edgecolor'].widget.set(r"black", run=False)
else:
splash = True
masterNet = launchVisionToRunNetworkAsApplication(splash=splash)
import os
masterNet.filename = os.path.abspath(__file__)
from traceback import print_exc
## loading libraries ##
from Vision.matplotlibNodes import matplotliblib
from Vision.StandardNodes import stdlib
try:
masterNet
except (NameError, AttributeError): # we run the network outside Vision
from NetworkEditor.net import Network
masterNet = Network()
masterNet.getEditor().addLibraryInstance(matplotliblib,"Vision.matplotlibNodes", "matplotliblib")
masterNet.getEditor().addLibraryInstance(stdlib,"Vision.StandardNodes", "stdlib")
try:
## saving node ReadTable ##
from Vision.StandardNodes import ReadTable
ReadTable_0 = ReadTable(constrkw={}, name='ReadTable', library=stdlib)
masterNet.addNode(ReadTable_0,71,7)
ReadTable_0.inputPortByName['filename'].widget.set(r"Data/axes_data.dat", run=False)
ReadTable_0.inputPortByName['numOfTopLinesToJump'].widget.set(0, run=False)
apply(ReadTable_0.inputPortByName['numOfBottomLinesToJump'].widget.configure, (), {'oneTurn': 10.0})
ReadTable_0.inputPortByName['numOfBottomLinesToJump'].widget.set(2, run=False)
ReadTable_0.inputPortByName['sep'].widget.set(r",", run=False)
ReadTable_0.inputPortByName['datatype'].widget.set(r"float", run=False)
apply(ReadTable_0.configure, (), {'paramPanelImmediate': 1, 'expanded': False})
splash = True
masterNet = launchVisionToRunNetworkAsApplication(splash=splash)
import os
masterNet.filename = os.path.abspath(__file__)
from traceback import print_exc
## loading libraries ##
from AutoDockTools.VisionInterface.Adt import Adt
from Vision.StandardNodes import stdlib
from WebServices.VisionInterface.WSNodes import wslib
try:
masterNet
except (NameError, AttributeError): # we run the network outside Vision
from NetworkEditor.net import Network
masterNet = Network()
masterNet.getEditor().addLibraryInstance(Adt,"AutoDockTools.VisionInterface.Adt", "Adt")
masterNet.getEditor().addLibraryInstance(stdlib,"Vision.StandardNodes", "stdlib")
masterNet.getEditor().addLibraryInstance(wslib,"WebServices.VisionInterface.WSNodes", "wslib")
from WebServices.VisionInterface.WSNodes import addOpalServerAsCategory
try:
addOpalServerAsCategory("http://kryptonite.nbcr.net/opal2", replace=False)
except:
pass
try:
## saving node GromosCluster ##
from Adt.Macro.GromosCluster import GromosCluster
GromosCluster_0 = GromosCluster(constrkw={}, name='GromosCluster', library=Adt)
masterNet.addNode(GromosCluster_0,396,213)
else:
splash = True
masterNet = launchVisionToRunNetworkAsApplication(splash=splash)
import os
masterNet.filename = os.path.abspath(__file__)
from traceback import print_exc
## loading libraries ##
from Pmv.VisionInterface.PmvNodes import pmvlib
from Vision.StandardNodes import stdlib
try:
masterNet
except (NameError, AttributeError): # we run the network outside Vision
from NetworkEditor.net import Network
masterNet = Network()
masterNet.getEditor().addLibraryInstance(pmvlib,"Pmv.VisionInterface.PmvNodes", "pmvlib")
masterNet.getEditor().addLibraryInstance(stdlib,"Vision.StandardNodes", "stdlib")
try:
## saving node AutoDock VS Result Directory ##
from Vision.StandardNodes import DirBrowserNE
AutoDock_VS_Result_Directory_28 = DirBrowserNE(constrkw={}, name='AutoDock VS Result Directory', library=stdlib)
masterNet.addNode(AutoDock_VS_Result_Directory_28,47,27)
AutoDock_VS_Result_Directory_28.inputPortByName['directory'].widget.set(r"visualization_0.1.1_input", run=False)
apply(AutoDock_VS_Result_Directory_28.configure, (), {'paramPanelImmediate': 1})
except:
print "WARNING: failed to restore DirBrowserNE named AutoDock VS Result Directory in network masterNet"
print_exc()
AutoDock_VS_Result_Directory_28=None
masterNet = launchVisionToRunNetworkAsApplication(splash=splash)
import os
masterNet.filename = os.path.abspath(__file__)
from traceback import print_exc
## loading libraries ##
from Vision.matplotlibNodes import matplotliblib
from Vision.StandardNodes import stdlib
from DejaVu.VisionInterface.DejaVuNodes import vizlib
try:
masterNet
except (NameError, AttributeError): # we run the network outside Vision
from NetworkEditor.net import Network
masterNet = Network()
masterNet.getEditor().addLibraryInstance(matplotliblib,
"Vision.matplotlibNodes",
"matplotliblib")
masterNet.getEditor().addLibraryInstance(stdlib, "Vision.StandardNodes",
"stdlib")
masterNet.getEditor().addLibraryInstance(vizlib,
"DejaVu.VisionInterface.DejaVuNodes",
"vizlib")
try:
## saving node Histogram ##
from Vision.matplotlibNodes import HistogramNE
Histogram_0 = HistogramNE(constrkw={},
name='Histogram',
library=matplotliblib)