def pyFoamDict(self, application="foamStar"):
d = DictProxy()
if application == "foamStar":
# for key, val in self.waveCondition.pyFoamDict(application = application).items():
# d[key] = val
d["${}Wave".format(self.name)] = ""
else:
d["waveTheoryName"] = waveTypeDict[
self.waveCondition.waveType][application]
if self.relax:
r = DictProxy()
if self.patchNames is None:
r["zoneName"] = self.name + "Zone"
# r["relaxationScheme"] = "spatial"
r["origin"] = Vector(*self.origin)
r["orientation"] = Vector(*self.orientation)
# r["relaxationShape"] = "rectangular"
else:
r["relaxationScheme"] = "farfield"
r["zoneName"] = self.name + "Zone"
r["farfieldDistance"] = self.length
r["blendingDistance"] = self.length * 0.95
r["farfieldPatchNames"] = self.patchNames
d["relaxationZone"] = r
return d
def testMakeDictionaryProxy(self):
d=DictProxy()
d["b"]=2
d["a"]=1
g=FoamFileGenerator(d)
self.assertEqual(str(g),"b 2;\na 1;\n")
d=DictProxy()
d["a"]=1
d["b"]=2
g=FoamFileGenerator(d)
self.assertEqual(str(g),"a 1;\nb 2;\n")
d=DictProxy()
d[u("a")]=1
d["b"]=u("2")
g=FoamFileGenerator(d)
self.assertEqual(str(g),"a 1;\nb 2;\n")
def p_dictionary(self, p):
'''dictionary : '{' enter_dict dictbody '}' exit_dict
| '{' '}' '''
if len(p) == 6:
p[0] = p[5]
else:
p[0] = DictProxy()
def pyFoamDict(self, application="foamStar"):
d = DictProxy()
d["waveType"] = waveTypeDict[self.waveType][application]
if self.waveType != "noWaves":
d["height"] = self.height
d["period"] = self.period
d["depth"] = self.depth
d["refTime"] = self.startTime
d["startTime"] = self.startTime
d["rampTime"] = self.rampTime
if self.waveType == "streamFunction":
d["order"] = 25
if application == "foamExtend" or application == "swenseFoam":
d["wind"] = Vector(0., 0., 0.)
d["currentType"] = "constantCurrent"
d["U0"] = Vector(0, 0., 0.)
d["setEulerianCurrent"] = True
d["EulerianCurrent"] = self.U0
d["waveDirection"] = Vector(*self.refDirection)
d["phi"] = 0.
#In wave2foam, with "EulerianCurrent", input is encounter period
# d["period"] = 2*pi / omega2omegae(2*pi / self.period , v = self.U0, beta = 180.)
elif application == "foamStar":
if self.waveType != "noWaves":
d["refDirection"] = Vector(*self.refDirection)
d["U0"] = Vector(self.U0, 0., 0.)
d["EulerianCurrent"] = 0.0
else:
raise (Exception("Application not known {}".format(application)))
return d
def testMakeDictionaryProxyBool(self):
d=DictProxy()
d["b"]=True
d["a"]=False
g=FoamFileGenerator(d)
self.assertEqual(str(g),"b yes;\na no;\n")
self.assertEqual(g.makeString(firstLevel=True),"b yes;\na no;\n")
def setWaveProbes(waveProbesList,
application="foamStar",
writeProbesInterval=0.1,
OFversion=5):
d = DictProxy()
d["type"] = "surfaceElevation"
d["fields"] = "({})".format(alpha[application])
d["writePrecision"] = 6
d["interpolationScheme"] = "cellPointFace"
if OFversion == 5:
d["writeControl"] = "timeStep"
d["writeInterval"] = 1
else:
d["outputControl"] = "timeStep"
d["outputInterval"] = 1
if application != "foamStar": # navalFoam ?
d["file"] = "surfaceElevation.dat"
if writeProbesInterval is not None:
d["surfaceSampleDeltaT"] = writeProbesInterval
d["sets"] = [
"p_{0:05} {{start ({1:} {2:} {3:}); end ({1:} {2:} {4:}); type face; axis z; nPoints {5:}; }}"
.format(i, *p) for i, p in enumerate(waveProbesList)
]
return d
def parse(self, content):
"""Constructs a representation of the file"""
temp = ParsedParameterFile.parse(self, content)
self.content = DictProxy()
for i in range(0, len(temp), 2):
self.content[temp[i]] = temp[i + 1]
return self.content
def manipulate(self,content):
lenData=2+2+(2*7+3)+2
rawData=zip(*[content[i::lenData] for i in range(lenData)])
content=DictProxy()
for d in rawData:
name=d[0]
data=d[2:]
used=0
specDict={}
specDict["nMoles"]=data[used]
specDict["molWeight"]=data[used+1]
used+=2
thermDict={}
thermDict["Tlow"]=data[used]
thermDict["Thigh"]=data[used+1]
thermDict["Tcommon"]=data[used+2]
thermDict["highCpCoeffs"]=list(data[used+3:used+3+7])
thermDict["lowCpCoeffs"]=list(data[used+3+7:used+3+2*7])
used+=2*7+3
transDict={}
transDict["As"]=data[used]
transDict["Ts"]=data[used+1]
used+=2
if len(data)!=used:
warning("Not all data for",name,"used:",used,len(data))
comment=self.makeComment(d)
content[name]={"specie":specDict,
"thermodynamics":thermDict,
"transport":transDict}
content.addDecoration(name,comment)
return content
def __init__(self,
name,
backup=False,
className="dictionary",
objectName=None,
createZipped=False,
**kwargs):
ParsedParameterFile.__init__(self,
name,
backup=backup,
dontRead=True,
createZipped=createZipped,
**kwargs)
if objectName == None:
objectName = path.basename(name)
self.content = DictProxy()
self.header = {
"version": "2.0",
"format": "ascii",
"class": className,
"object": objectName
}
case,
mdFile=None,
modes2use=None,
datFile=None,
dmigFile=None,
draft=0.,
scale=1.,
vtkOut=True,
hullPatch=None,
localPts=None):
res = cls(name=join(case, getFilePath("initFlexDict")), read=False)
res.header["class"] = "dictionary"
fem = DictProxy()
fem["mdFile"] = '"../{}"; selected ( '.format(
mdFile) + len(modes2use) * '{} '.format(*modes2use) + ')'
fem["datFile"] = '"../{}"'.format(datFile)
fem["dmigMfile"] = '"../{}"'.format(dmigFile)
fem["dmigKfile"] = '"../{}"'.format(dmigFile)
fem["pchCoordinate"] = SymmTensor(*[0, 0, -draft, 0, 0, 0])
fem["pchScaleMode"] = scale
fem["pchLengthUnit"] = 1
fem["pchMassUnit"] = 1
if not vtkOut: fem["outputToVTK"] = "no"
fem["patches"] = "({})".format(hullPatch)
fem["ySym"] = "(true)"
if localPts is not None:
if len(localPts) > 0:
fem["pointList"] = "(localMotion)"
"""
Convenience class to simply write boudary condition for sea-keeping case
"""
class BoundaryOmega(ReadWriteFile):
@classmethod
def Build(cls, case, symmetry=1, wallFunction=False, application="foamStar", namePatch=namePatch, omega=2., case2D=False):
patch = namePatch[application]
res = cls(name=join(case, getFilePath("boundaryOmega")), read=False)
res.header["class"] = "volScalarField"
res["dimensions"] = Dimension(*[0, 0, -1, 0, 0, 0, 0])
res["internalField"] = "uniform {}".format(omega)
bf = DictProxy()
bf[patch["outlet"]] = {"type": "fixedValue", "value": omega}
bf[patch["inlet"]] = {"type": "fixedValue", "value": omega}
if application == "foamStar":
bf[patch["side1"]] = {"type": "fixedValue", "value": omega}
bf[patch["side2"]] = {"type": "fixedValue", "value": omega}
else:
bf[patch["side"]] = {"type": "fixedValue", "value": omega}
bf[patch["bottom"]] = {"type": "fixedValue", "value": omega}
bf[patch["top"]] = {"type": "fixedValue", "value": omega}
bf[patch["structure"]] = {"type": "zeroGradient"}
bf["defaultFaces"] = {"type": "empty"}
res["boundaryField"] = bf
if wallFunction:
res["boundaryField"][patch["structure"]] = {"type": "omegaWallFunction"}
FvSchemes dictionnary
"""
@classmethod
def Build(cls,
case,
application="foamStar",
prsJump=False,
orthogonalCorrection=False,
blendCN=0.9,
simType="steady",
limitedGrad=False):
res = cls(name=join(case, getFilePath("fvSchemes")), read=False)
#-------- ddtSchemes
ddt = DictProxy()
if simType.lower() == "steady":
ddt["default"] = "steadyState"
ddt["ddt(U)"] = "Euler"
ddt["ddt(alpha.water)"] = "Euler"
elif simType.lower() == "euler":
ddt["default"] = "Euler"
ddt["ddt(U)"] = "Euler"
else:
ddt["default"] = "CrankNicolson {}".format(blendCN)
ddt["ddt(rho,U)"] = "backward"
ddt["ddt(U)"] = "Euler"
res["ddtSchemes"] = ddt
#-------- gradSchemes
grad = DictProxy()
import PyFoam from ideFoam.inputFiles import ReadWriteFile, getFilePath from PyFoam.Basics.DataStructures import DictProxy from os.path import join from copy import deepcopy """ Convenience class to simply write "fvSheme" """ GAMG_prec_1 = DictProxy() GAMG_prec_1["preconditioner"] = "GAMG" GAMG_prec_1["tolerance"] = 1e-7 GAMG_prec_1["relTol"] = 0 GAMG_prec_1["smoother"] = "DICGaussSeidel" GAMG_prec_1["nPreSweeps"] = 0 GAMG_prec_1["nPostSweeps"] = 2 GAMG_prec_1["nFinestSweeps"] = 2 GAMG_prec_1["cacheAgglomeration"] = "false" GAMG_prec_1["nCellsInCoarsestLevel"] = 10 GAMG_prec_1["agglomerator"] = "faceAreaPair" GAMG_prec_1["mergeLevels"] = 1 GAMG_prec_2 = DictProxy() GAMG_prec_2["preconditioner"] = "GAMG" GAMG_prec_2["tolerance"] = 1e-7 GAMG_prec_2["relTol"] = 0 GAMG_prec_2["nVcycles"] = 2 GAMG_prec_2["smoother"] = "DICGaussSeidel" GAMG_prec_2["nPreSweeps"] = 2
geometricCut=True,
writeMesh=False):
"""Create RefineMeshDict from a few parameter
"""
suffix = ''
if orient is not None: suffix += '.' + orient
if name is not None: suffix += '.' + name
res = cls(join(case, "system", "refineMeshDict" + suffix), read=False)
res["set"] = set
if refineUptoCellLevel is not None:
res["refineUptoCellLevel"] = refineUptoCellLevel
res["coordinateSystem"] = coordinateSystem
globalCoef = DictProxy()
globalCoef["tan1"] = "(1 0 0)"
globalCoef["tan2"] = "(0 1 0)"
res["globalCoeffs"] = globalCoef
if orient is None:
patchCoef = DictProxy()
if patch == "outside":
patchCoef["patch"] = patch
patchCoef["tan1"] = "(1 0 0)"
else:
patchCoef["patch"] = "patchName"
patchCoef["tan1"] = "(0 1 0)"
patchCoef["tan2"] = "(0 0 1)"
res["patchLocalCoeffs"] = patchCoef
Convenience class to simply write SurfaceFeatureExtractDict
"""
class SurfaceFeatureExtractDict(ReadWriteFile):
"""
SurfaceFeatureExtractDict dictionary
"""
@classmethod
def Build(cls, case, stlname="body"):
res = cls(name=join(case, getFilePath("surfaceFeatureExtractDict")),
read=False)
stlname = stlname.split('.stl')[0] #remove .stl extension
body = DictProxy()
body["extractionMethod"] = "extractFromSurface"
body["extractFromSurfaceCoeffs"] = {"includedAngle": 150.}
body["subsetFeatures"] = {
"nonManifoldEdges": "yes",
"openEdges": "yes"
}
body["writeObj"] = "yes"
res[stlname + ".stl"] = body
return res
if __name__ == "__main__":
print(SurfaceFeatureExtractDict.Build("test"))
OpenFOAM version used
"""
res = cls(name=join(case, getFilePath("snappyHexMeshDict")),
read=False)
stlname = stlname.split('.stl')[0] #remove .stl extension
res["#inputMode"] = "overwrite"
res["castellatedMesh"] = castellatedMesh
res["snap"] = snap
res["addLayers"] = addLayers
geometry = DictProxy()
body = DictProxy()
body["type"] = "triSurfaceMesh"
body["name"] = patchName
body["patchInfo"] = {"type": "wall"}
geometry['"' + stlname + '.stl"'] = body
res["geometry"] = geometry
castel = DictProxy()
castel["maxLocalCells"] = 1000000
castel["maxGlobalCells"] = 10000000
castel["minRefinementCells"] = 0
castel["nCellsBetweenLevels"] = nCellsBetweenLevels
castel["locationInMesh"] = "({} {} {})".format(*locationInMesh)
castel["features"] = [{
res = cls( name = join(case, getFilePath("extrudeMeshDict") ), read = False )
patch = namePatch[version]
res["constructFrom"] = "patch"
res["sourceCase"] = sourceCase
res["sourcePatches"] = [patch[sourcePatch]]
res["exposedPatchName"] = patch[exposedPatchName]
if flipNormals :
res["flipNormals"] = True
res["extrudeModel"] = "linearNormal"
res["nLayers"] = nLayers
res["expansionRatio"] = expansionRatio
linCoef = DictProxy()
linCoef["thickness"] = thickness
res["linearNormalCoeffs"] = linCoef
res["mergeFaces"] = mergeFaces
res["mergeTol"] = mergeTol
return res
if __name__ == "__main__" :
print(ExtrudeMeshDict.Build("test"))
def manipulate(self,content):
newReactions=DictProxy()
rData=zip(*[content["reactions"][i::3] for i in range(3)])
cnt=1
for rType,scheme,parameters in rData:
name="reaction%d"%cnt
cnt+=1
r={}
r["type"]=rType
r["reaction"]='"'+str(scheme).strip()+'"'
if rType in ["irreversibleArrheniusReaction",
"reversibleArrheniusReaction"]:
r["A"]=parameters[0]
r["beta"]=parameters[1]
r["Ta"]=parameters[2]
elif rType in ["reversiblethirdBodyArrheniusReaction"]:
r["A"]=parameters[0][0]
r["beta"]=parameters[0][1]
r["Ta"]=parameters[0][2]
r["defaultEfficiency"]=parameters[1][0]
r["coeffs"]=self.makeCoeffList(parameters[1][1:],
parameters[1][0],
content["species"])
elif rType in ["reversibleArrheniusLindemannFallOffReaction"]:
r["k0"]={}
r["k0"]["A"]=parameters[0][0]
r["k0"]["beta"]=parameters[0][1]
r["k0"]["Ta"]=parameters[0][2]
r["kInf"]={}
r["kInf"]["A"]=parameters[1][0]
r["kInf"]["beta"]=parameters[1][1]
r["kInf"]["Ta"]=parameters[1][2]
r["F"]={}
r["thirdBodyEfficiencies"]={}
r["thirdBodyEfficiencies"]["defaultEfficiency"]=parameters[2][0]
r["thirdBodyEfficiencies"]["coeffs"]=self.makeCoeffList(parameters[2][1:],
parameters[2][0],
content["species"])
elif rType in ["reversibleArrheniusTroeFallOffReaction"]:
r["k0"]={}
r["k0"]["A"]=parameters[0][0]
r["k0"]["beta"]=parameters[0][1]
r["k0"]["Ta"]=parameters[0][2]
r["kInf"]={}
r["kInf"]["A"]=parameters[1][0]
r["kInf"]["beta"]=parameters[1][1]
r["kInf"]["Ta"]=parameters[1][2]
r["F"]={}
r["F"]["alpha"]=parameters[2][0]
r["F"]["Tsss"]=parameters[2][1]
r["F"]["Ts"]=parameters[2][2]
r["F"]["Tss"]=parameters[2][3]
r["thirdBodyEfficiencies"]={}
r["thirdBodyEfficiencies"]["defaultEfficiency"]=parameters[3][0]
r["thirdBodyEfficiencies"]["coeffs"]=self.makeCoeffList(parameters[3][1:],
parameters[3][0],
content["species"])
else:
r["unsupported"]=parameters
newReactions[name]=r
content["reactions"]=newReactions
def p_enter_dict(self, p):
'''enter_dict :'''
self.dictStack.append(DictProxy())
Zgrading[i])
res["blocks"] = [blockstr]
else:
ny = Ycells * (1 + (not sym))
rXY = (xmax - xmin) / (ymax - ymin)
rYZ = (zmax - zmin) / (ymax - ymin)
ny = int(round(ny * (np.sqrt(2)**(gridlvl - 1))))
nz = int(round(ny * rYZ * cellRatio))
if ndim > 2: nx = int(round(ny * rXY))
else: nx = 1
res["blocks"] = '( hex (0 1 2 3 4 5 6 7) ( {:d} {:d} {:d} ) simpleGrading (1 1 1) )'.format(
nx, ny, nz)
res["edges"] = '()'
if createPatch:
if patches is not None: res["patches"] = patches
else: res["patches"] = default_patches
else:
faces = DictProxy()
faces["type"] = 'patch'
faces["faces"] = '()'
res["boundary"] = ["defaultFaces", faces]
res["mergePatchPairs"] = '()'
return res
if __name__ == "__main__":
print(BlockMeshDict.Build("test"))
def __init__(self,
content,
fName=None,
debug=False,
noHeader=False,
noBody=False,
doMacroExpansion=False,
boundaryDict=False,
preserveComments=True,
preserveNewlines=True,
listDict=False,
listDictWithHeader=False,
listLengthUnparsed=None,
binaryMode=False,
treatBinaryAsASCII=False,
duplicateCheck=False,
noVectorOrTensor=False,
dictStack=None,
duplicateFail=True):
""":param content: the string to be parsed
:param fName: Name of the actual file (if any)
:param debug: output debug information during parsing
:param noHeader: switch that turns off the parsing of the header
:param duplicateCheck: Check for duplicates in dictionaries
:param duplicateFail: Fail if a duplicate is discovered"""
self.binaryMode = binaryMode
self.treatBinaryAsASCII = treatBinaryAsASCII
self.fName = fName
self.data = None
self.header = None
self.debug = debug
self.listLengthUnparsed = listLengthUnparsed
self.doMacros = doMacroExpansion
self.preserveComments = preserveComments
self.preserveNewLines = preserveNewlines
self.duplicateCheck = duplicateCheck
self.duplicateFail = duplicateFail
self.noVectorOrTensor = noVectorOrTensor
self.inHeader = True
self.inBinary = False
self.checkPrelistLength = True
# Make sure that the first comment is discarded
self.collectDecorations = False
self.inputMode = inputModes.merge
self._decorationBuffer = ""
startCnt = 0
self.dictStack = dictStack
if self.dictStack == None:
self.dictStack = [DictProxy()]
if noBody:
self.start = 'noBody'
startCnt += 1
if noHeader:
self.inHeader = False
self.start = 'noHeader'
startCnt += 1
self.collectDecorations = True
if listDict:
self.inHeader = False
self.start = 'pureList'
startCnt += 1
self.dictStack = []
self.collectDecorations = True
if listDictWithHeader:
self.start = 'pureListWithHeader'
startCnt += 1
if boundaryDict:
self.start = 'boundaryDict'
startCnt += 1
self.checkPrelistLength = False
if startCnt > 1:
error("Only one start symbol can be specified.", startCnt,
"are specified")
PlyParser.__init__(self, debug=debug)
#sys.setrecursionlimit(50000)
#print sys.getrecursionlimit()
self.emptyCnt = 0
self.header, self.data = self.parse(content)
@classmethod
def Build_imposed(cls,
case,
dispFile='',
cog=[0., 0., 0.],
OFversion=5,
application="foamStar"):
"""Build dynamicMeshDict for cases with imposed motions
"""
res = cls(name=join(case, getFilePath("dynamicMeshDict")), read=False)
if OFversion == 5:
res["dynamicFvMesh"] = "dynamicMotionSolverFvMesh"
res["motionSolver"] = "solidBody"
res["solidBodyMotionFunction"] = "tabulated6DoFMotion"
tab = DictProxy()
tab["timeDataFileName"] = '"' + dispFile + '"'
tab["CofG"] = '( {:.6f} {:.6f} {:.6f} )'.format(*cog)
res["tabulated6DoFMotionCoeffs"] = tab
else:
res["dynamicFvMesh"] = "solidBodyMotionFvMesh"
sdc = DictProxy()
sdc["solidBodyMotionFunction"] = "BVtabulated6DoFMotion"
tab = DictProxy()
tab["timeDataFileName"] = '"' + dispFile + '"'
tab["CofG"] = '( {:.6f} {:.6f} {:.6f} )'.format(*cog)
sdc["BVtabulated6DoFMotionCoeffs"] = tab
res["solidBodyMotionFvMeshCoeffs"] = sdc
return res
@classmethod
res["adjustTimeStep"] = "no"
res["maxCo"] = 0.5
res["maxAlphaCo"] = 0.5
res["maxDeltaT"] = 1.
if application == "foamStar" :
res ["libs"] = ['"libfoamStar.so"' ,
#'"libBVtabulated6DoFMotion.so"',
]
elif application == "snappyHexMesh" :
pass
else :
res ["libs"] = [ '"libforces.so"' , ]
# Set functions
fDict = DictProxy()
# Motions
if outputMotions:
motionDict = DictProxy()
motionDict["type"] = "motionInfo"
fDict["motionInfo"] = motionDict
# Internal loads
if vbmPatch is not None :
vbmDict = DictProxy()
vbmDict["type"] = "internalLoads"
if OFversion==5:
vbmDict["writeControl"] = "timeStep"
vbmDict["writeInterval"] = 1
else:
case,
rhoWater=1000,
nuWater=1e-6,
rhoAir=1.,
nuAir=1.48e-05,
sigma=0.0,
application="foamStar"):
res = cls(name=join(case, getFilePath("transportProperties")),
read=False)
res.header["class"] = "dictionary"
if application == "foamStar": res["phases"] = ["water", "air"]
dw = DictProxy()
dw["transportModel"] = "Newtonian"
dw["nu"] = "nu [0 2 -1 0 0 0 0] {}".format(nuWater)
dw["rho"] = "rho [1 -3 0 0 0 0 0] {}".format(rhoWater)
res['"' + water[application] + '"'] = dw
da = DictProxy()
da["transportModel"] = "Newtonian",
da["nu"] = "nu [0 2 -1 0 0 0 0] {}".format(nuAir)
da["rho"] = "rho [1 -3 0 0 0 0 0] {}".format(rhoAir)
res['"' + air[application] + '"'] = da
res[r"sigma"] = "sigma [1 0 -2 0 0 0 0] {}".format(sigma)
return res