iend = np.where([ss.startswith('# end-settings-section')
for ss in lines])[0][0]
with open(current_sim_abs_path + '/' + settings_to_be_replaced_in,
'w') as fid:
fid.writelines(lines[:istart])
fid.write(settings_section + '\n')
fid.writelines(lines[iend + 1:])
# Prepare job script
job_content = f'''#!/bin/bash
{environment_preparation}
# Environment preparation
echo PYTHONPATH=$PYTHONPATH
echo which python
which python
cd {current_sim_abs_path}
python 002_build_mode_matrix.py
'''
with open(current_sim_abs_path + '/job.job', 'w') as fid:
fid.write(job_content)
# Prepare htcondor cluster of jobs
import PyPARIS_sim_class.htcondor_config as htcc
htcc.htcondor_config(scan_folder_abs,
time_requirement_days=0.1,
htcondor_files_in=scan_folder_abs)
fi
python 000_simulation_matrix_map.py
done
'''
with open(current_sim_abs_path + '/run_it_several_times', 'w') as fid:
fid.write(run_script_curr)
# Prepare job script
job_content = f'''#!/bin/bash
{environment_preparation}
# Environment preparation
echo PYTHONPATH=$PYTHONPATH
echo which python
which python
cd {current_sim_abs_path}
bash run_it_several_times
'''
with open(current_sim_abs_path + '/job.job', 'w') as fid:
fid.write(job_content)
# Prepare htcondor cluster of jobs
import PyPARIS_sim_class.htcondor_config as htcc
htcc.htcondor_config(
scan_folder_abs,
time_requirement_days=2., # 120 minutes
htcondor_files_in=scan_folder_abs)