def execute_for_all(resultspath, command):
"""Call a given python script with the simulation results data file as last
command line argument. The script and the data file are specified by (relative)
file system paths.
:param resultspath: The path where to look for simulation data.
:param command: The python script that gets called for all simulations.
"""
for simulationpath in get_result_dirs(resultspath):
print(" Executing code for datafile in {}".format(simulationpath))
# The file(s) with the simulation data
resfiles = get_results_file(simulationpath)
# Handle case where multiple hdf5 files are found
if type(resfiles) is list:
print(" Warning: more than one results file found!")
else:
resfiles = [resfiles]
# For each file call the given script
for resfile in resfiles:
sp.call(["python"] + command + [resfile])
# Move newly created files back to the simulation path.
# NOTE: It is the responsability of the code in the
# 'scriptcode' script to produce filenames that
# do not yield collisions. Otherwise the files
# will be overwritten without any warning!
for ext in save_extensions:
for afile in glob("*" + ext):
sp.call(["mv", afile, simulationpath])
def execute_for_all(resultspath, command):
"""Call a given python script with the simulation results data file as last
command line argument. The script and the data file are specified by (relative)
file system paths.
:param resultspath: The path where to look for simulation data.
:param command: The python script that gets called for all simulations.
"""
for simulationpath in get_result_dirs(resultspath):
print(" Executing code for datafile in {}".format(simulationpath))
# The file(s) with the simulation data
resfiles = get_results_file(simulationpath)
# Handle case where multiple hdf5 files are found
if type(resfiles) is list:
print(" Warning: more than one results file found!")
else:
resfiles = [resfiles]
# For each file call the given script
for resfile in resfiles:
sp.call(["python"] + command + [resfile])
# Move newly created files back to the simulation path.
# NOTE: It is the responsability of the code in the
# 'scriptcode' script to produce filenames that
# do not yield collisions. Otherwise the files
# will be overwritten without any warning!
for ext in save_extensions:
for afile in glob("*" + ext):
sp.call(["mv", afile, simulationpath])
def execute_for_all(resultspath, scriptcode, scriptargs):
"""Call a given python script with the simulation results data file as first
command line argument. The script and the data file are specified by (relative)
file system paths.
:param resultspath: The path where to look for simulation data.
:param scriptcode: The python script that gets called for all simulations.
:param scriptargs: Optional (constant) arguments to the script.
"""
# UNBUFFERED timelog file
with open("logtime_forall", "w", 0) as timelog:
for simulationpath in get_result_dirs(resultspath):
starttime = time.time()
timelog.writelines(["New script starting at: " + time.ctime(starttime) + "\n",
"Executing code for datafile in " + simulationpath + "\n"])
print(" Executing code for datafile in " + simulationpath)
# The file with the simulation data
afile = get_results_file(simulationpath)
# Call the given script
sp.call(["python", scriptcode, afile] + scriptargs)
endtime = time.time()
timelog.writelines(["Script now finished at timestamp: " + time.ctime(endtime) + "\n",
"Script took " + str(endtime-starttime) + " second to run\n\n"])
# Move newly created files back to the simulation path.
# NOTE: It is the responsability of the code in the
# 'scriptcode' script to produce filenames that
# do not yield collisions. Otherwise the files
# will beoverwritten without any warning!
for ext in save_extensions:
for afile in glob("*"+ext):
sp.call(["mv", afile, simulationpath])