library=stdlib)
masterNet.addNode(PreserveCharges__39, 617, 20)
PreserveCharges__39.inputPortByName['button'].widget.set(1, run=False)
PreserveCharges__39.configure(*(), **{'paramPanelImmediate': 1})
except:
print(
"WARNING: failed to restore CheckButtonNE named PreserveCharges? in network masterNet"
)
print_exc()
PreserveCharges__39 = None
try:
## saving node DownloadSaveDir ##
from WebServices.VisionInterface.WSNodes import DownloadSaveDirNode
DownloadSaveDir_40 = DownloadSaveDirNode(constrkw={},
name='DownloadSaveDir',
library=wslib)
masterNet.addNode(DownloadSaveDir_40, 170, 558)
DownloadSaveDir_40.inputPortByName['url'].configure(
*(), **{'defaultValue': None})
DownloadSaveDir_40.inputPortByName['url'].rebindWidget()
DownloadSaveDir_40.inputPortByName['url'].widget.set(r"", run=False)
DownloadSaveDir_40.inputPortByName['url'].unbindWidget()
DownloadSaveDir_40.configure(*(), **{'paramPanelImmediate': 1})
except:
print(
"WARNING: failed to restore DownloadSaveDirNode named DownloadSaveDir in network masterNet"
)
print_exc()
DownloadSaveDir_40 = None
PreserveCharges__39 = CheckButtonNE(constrkw={},
name='PreserveCharges?',
library=stdlib)
masterNet.addNode(PreserveCharges__39, 617, 20)
PreserveCharges__39.inputPortByName['button'].widget.set(1, run=False)
apply(PreserveCharges__39.configure, (), {'paramPanelImmediate': 1})
except:
print "WARNING: failed to restore CheckButtonNE named PreserveCharges? in network masterNet"
print_exc()
PreserveCharges__39 = None
try:
## saving node DownloadSaveDir ##
from WebServices.VisionInterface.WSNodes import DownloadSaveDirNode
DownloadSaveDir_40 = DownloadSaveDirNode(constrkw={},
name='DownloadSaveDir',
library=wslib)
masterNet.addNode(DownloadSaveDir_40, 170, 558)
apply(DownloadSaveDir_40.inputPortByName['url'].configure, (),
{'defaultValue': None})
DownloadSaveDir_40.inputPortByName['url'].rebindWidget()
DownloadSaveDir_40.inputPortByName['url'].widget.set(r"", run=False)
DownloadSaveDir_40.inputPortByName['url'].unbindWidget()
apply(DownloadSaveDir_40.configure, (), {'paramPanelImmediate': 1})
except:
print "WARNING: failed to restore DownloadSaveDirNode named DownloadSaveDir in network masterNet"
print_exc()
DownloadSaveDir_40 = None
try:
## saving node GetStructuresFromDir ##
def afterAddingToNetwork(self):
masterNet = self.macroNetwork
from NetworkEditor.macros import MacroNode
MacroNode.afterAddingToNetwork(self)
from Vision.StandardNodes import stdlib
from WebServices.VisionInterface.WSNodes import wslib
## building macro network ##
GromosCluster_33 = self
from traceback import print_exc
from Vision.StandardNodes import stdlib
from WebServices.VisionInterface.WSNodes import wslib
masterNet.getEditor().addLibraryInstance(
wslib, "WebServices.VisionInterface.WSNodes", "wslib")
from WebServices.VisionInterface.WSNodes import addOpalServerAsCategory
try:
addOpalServerAsCategory("http://kryptonite.nbcr.net/opal2",
replace=False)
except:
pass
try:
## saving node input Ports ##
input_Ports_34 = self.macroNetwork.ipNode
input_Ports_34.configure(
*(), **{
'paramPanelImmediate': 1,
'expanded': False
})
except:
print(
"WARNING: failed to restore MacroInputNode named input Ports in network self.macroNetwork"
)
print_exc()
input_Ports_34 = None
try:
## saving node output Ports ##
output_Ports_35 = self.macroNetwork.opNode
output_Ports_35.configure(
*(), **{
'paramPanelImmediate': 1,
'expanded': False
})
output_Ports_35.move(236, 302)
except:
print(
"WARNING: failed to restore MacroOutputNode named output Ports in network self.macroNetwork"
)
print_exc()
output_Ports_35 = None
try:
## saving node GROMOS_ClusterFiles_kryptonite_nbcr_net ##
from NetworkEditor.items import FunctionNode
GROMOS_ClusterFiles_kryptonite_nbcr_net_36 = FunctionNode(
functionOrString='GROMOS_ClusterFiles_kryptonite_nbcr_net',
host="http://kryptonite.nbcr.net/opal2",
namedArgs={
'expert_options': '',
'rmsd': '0.125',
'traj': '',
'prefix': '',
'default_options':
'-o -g -dist -ev -sz -tr -ntr -clid -cl',
'active': '',
'localRun': False,
'method': 'gromos',
'execPath': ''
},
constrkw={
'functionOrString':
"'GROMOS_ClusterFiles_kryptonite_nbcr_net'",
'host': '"http://kryptonite.nbcr.net/opal2"',
'namedArgs': {
'expert_options': '',
'rmsd': '0.125',
'traj': '',
'prefix': '',
'default_options':
'-o -g -dist -ev -sz -tr -ntr -clid -cl',
'active': '',
'localRun': False,
'method': 'gromos',
'execPath': ''
}
},
name='GROMOS_ClusterFiles_kryptonite_nbcr_net',
library=wslib)
self.macroNetwork.addNode(
GROMOS_ClusterFiles_kryptonite_nbcr_net_36, 200, 98)
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'expert_options'].configure(*(), **{'defaultValue': None})
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'rmsd'].configure(*(), **{
'defaultValue': None,
'required': True
})
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'traj'].configure(*(), **{
'defaultValue': None,
'required': True
})
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'prefix'].configure(*(), **{'defaultValue': None})
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'default_options'].configure(*(), **{'defaultValue': None})
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'active'].configure(*(), **{
'defaultValue': None,
'required': True
})
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'localRun'].configure(*(), **{'defaultValue': None})
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'method'].configure(*(), **{'defaultValue': None})
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'execPath'].configure(*(), **{'defaultValue': None})
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'expert_options'].widget.set(r"", run=False)
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'rmsd'].rebindWidget()
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'rmsd'].widget.set(r"0.125", run=False)
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'rmsd'].unbindWidget()
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'traj'].rebindWidget()
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'traj'].widget.set(r"", run=False)
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'traj'].unbindWidget()
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'prefix'].widget.set(r"", run=False)
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'default_options'].widget.set(
r"-o -g -dist -ev -sz -tr -ntr -clid -cl", run=False)
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'active'].rebindWidget()
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'active'].widget.set(r"", run=False)
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'active'].unbindWidget()
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'localRun'].widget.set(0, run=False)
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'method'].widget.configure(
*(), **{
'choices': ('gromos', 'linkage', 'jarvis-patrick',
'monte-carlo', 'diagonalization')
})
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'method'].widget.set(r"gromos", run=False)
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.inputPortByName[
'execPath'].widget.set(r"", run=False)
GROMOS_ClusterFiles_kryptonite_nbcr_net_36.configure(
*(), **{
'paramPanelImmediate': 1,
'expanded': False
})
except:
print(
"WARNING: failed to restore FunctionNode named GROMOS_ClusterFiles_kryptonite_nbcr_net in network self.macroNetwork"
)
print_exc()
GROMOS_ClusterFiles_kryptonite_nbcr_net_36 = None
try:
## saving node GetClusterFrameLink ##
from WebServices.VisionInterface.WSNodes import GetMainURLFromListNode
GetClusterFrameLink_46 = GetMainURLFromListNode(
constrkw={}, name='GetClusterFrameLink', library=wslib)
self.macroNetwork.addNode(GetClusterFrameLink_46, 200, 164)
GetClusterFrameLink_46.inputPortByName['urls'].configure(
*(), **{'defaultValue': None})
code = """def doit(self, urls):
url = urls[0]
filename = url.split('''/''')[len(url.split('''/'''))-1]
nurl = url.strip(filename)
nurl = nurl + '''cluster_frames'''
pass
self.outputData(newurl=nurl)
"""
GetClusterFrameLink_46.configure(function=code)
GetClusterFrameLink_46.configure(
*(), **{
'paramPanelImmediate': 1,
'expanded': False
})
except:
print(
"WARNING: failed to restore GetMainURLFromListNode named GetClusterFrameLink in network self.macroNetwork"
)
print_exc()
GetClusterFrameLink_46 = None
try:
## saving node DownloadSaveDir ##
from WebServices.VisionInterface.WSNodes import DownloadSaveDirNode
DownloadSaveDir_51 = DownloadSaveDirNode(constrkw={},
name='DownloadSaveDir',
library=wslib)
self.macroNetwork.addNode(DownloadSaveDir_51, 253, 241)
DownloadSaveDir_51.inputPortByName['url'].configure(
*(), **{'defaultValue': None})
DownloadSaveDir_51.inputPortByName['path'].configure(
*(), **{'defaultValue': None})
DownloadSaveDir_51.inputPortByName['cutdirs'].configure(
*(), **{'defaultValue': None})
DownloadSaveDir_51.inputPortByName['url'].rebindWidget()
DownloadSaveDir_51.inputPortByName['url'].widget.set(r"",
run=False)
DownloadSaveDir_51.inputPortByName['url'].unbindWidget()
DownloadSaveDir_51.configure(*(), **{'paramPanelImmediate': 1})
except:
print(
"WARNING: failed to restore DownloadSaveDirNode named DownloadSaveDir in network self.macroNetwork"
)
print_exc()
DownloadSaveDir_51 = None
try:
## saving node Entry ##
from Vision.StandardNodes import EntryNE
Entry_54 = EntryNE(constrkw={}, name='Entry', library=stdlib)
self.macroNetwork.addNode(Entry_54, 347, 154)
Entry_54.inputPortByName['entry'].configure(
*(), **{'defaultValue': None})
Entry_54.inputPortByName['entry'].widget.set(r"3", run=False)
Entry_54.configure(*(), **{'paramPanelImmediate': 1})
except:
print(
"WARNING: failed to restore EntryNE named Entry in network self.macroNetwork"
)
print_exc()
Entry_54 = None
#self.macroNetwork.run()
self.macroNetwork.freeze()
## saving connections for network GromosCluster ##
input_Ports_34 = self.macroNetwork.ipNode
if input_Ports_34 is not None and GROMOS_ClusterFiles_kryptonite_nbcr_net_36 is not None:
try:
self.macroNetwork.connectNodes(
input_Ports_34,
GROMOS_ClusterFiles_kryptonite_nbcr_net_36,
"new",
"traj",
blocking=True,
splitratio=[0.45411042113261574, 0.54335719372693991])
except:
print(
"WARNING: failed to restore connection between input_Ports_34 and GROMOS_ClusterFiles_kryptonite_nbcr_net_36 in network self.macroNetwork"
)
if input_Ports_34 is not None and GROMOS_ClusterFiles_kryptonite_nbcr_net_36 is not None:
try:
self.macroNetwork.connectNodes(
input_Ports_34,
GROMOS_ClusterFiles_kryptonite_nbcr_net_36,
"new",
"active",
blocking=True,
splitratio=[0.50935546751136695, 0.51596797621119816])
except:
print(
"WARNING: failed to restore connection between input_Ports_34 and GROMOS_ClusterFiles_kryptonite_nbcr_net_36 in network self.macroNetwork"
)
if input_Ports_34 is not None and GROMOS_ClusterFiles_kryptonite_nbcr_net_36 is not None:
try:
self.macroNetwork.connectNodes(
input_Ports_34,
GROMOS_ClusterFiles_kryptonite_nbcr_net_36,
"new",
"rmsd",
blocking=True,
splitratio=[0.72697457023572398, 0.5609730307022871])
except:
print(
"WARNING: failed to restore connection between input_Ports_34 and GROMOS_ClusterFiles_kryptonite_nbcr_net_36 in network self.macroNetwork"
)
if GROMOS_ClusterFiles_kryptonite_nbcr_net_36 is not None and GetClusterFrameLink_46 is not None:
try:
self.macroNetwork.connectNodes(
GROMOS_ClusterFiles_kryptonite_nbcr_net_36,
GetClusterFrameLink_46,
"result",
"urls",
blocking=True,
splitratio=[0.72920790745169972, 0.25586352865051565])
except:
print(
"WARNING: failed to restore connection between GROMOS_ClusterFiles_kryptonite_nbcr_net_36 and GetClusterFrameLink_46 in network self.macroNetwork"
)
if GetClusterFrameLink_46 is not None and DownloadSaveDir_51 is not None:
try:
self.macroNetwork.connectNodes(
GetClusterFrameLink_46,
DownloadSaveDir_51,
"newurl",
"url",
blocking=True,
splitratio=[0.6813604229397745, 0.24060738045908744])
except:
print(
"WARNING: failed to restore connection between GetClusterFrameLink_46 and DownloadSaveDir_51 in network self.macroNetwork"
)
if input_Ports_34 is not None and DownloadSaveDir_51 is not None:
try:
self.macroNetwork.connectNodes(
input_Ports_34,
DownloadSaveDir_51,
"new",
"path",
blocking=True,
splitratio=[0.26234570709625593, 0.71051250549253275])
except:
print(
"WARNING: failed to restore connection between input_Ports_34 and DownloadSaveDir_51 in network self.macroNetwork"
)
output_Ports_35 = self.macroNetwork.opNode
if DownloadSaveDir_51 is not None and output_Ports_35 is not None:
try:
self.macroNetwork.connectNodes(
DownloadSaveDir_51,
output_Ports_35,
"output",
"new",
blocking=True,
splitratio=[0.32827353595918307, 0.22147048732628238])
except:
print(
"WARNING: failed to restore connection between DownloadSaveDir_51 and output_Ports_35 in network self.macroNetwork"
)
if Entry_54 is not None and DownloadSaveDir_51 is not None:
try:
self.macroNetwork.connectNodes(
Entry_54,
DownloadSaveDir_51,
"string",
"cutdirs",
blocking=True,
splitratio=[0.28715327854931738, 0.50903858482741082])
except:
print(
"WARNING: failed to restore connection between Entry_54 and DownloadSaveDir_51 in network self.macroNetwork"
)
self.macroNetwork.runOnNewData.value = False
## modifying MacroInputNode dynamic ports
input_Ports_34 = self.macroNetwork.ipNode
input_Ports_34.outputPorts[1].configure(
name='GROMOS_ClusterFiles_kryptonite_nbcr_net_traj')
input_Ports_34.outputPorts[2].configure(
name='GROMOS_ClusterFiles_kryptonite_nbcr_net_active')
input_Ports_34.outputPorts[3].configure(
name='GROMOS_ClusterFiles_kryptonite_nbcr_net_rmsd')
input_Ports_34.outputPorts[4].configure(name='DownloadSaveDir_path')
## modifying MacroOutputNode dynamic ports
output_Ports_35 = self.macroNetwork.opNode
output_Ports_35.inputPorts[1].configure(singleConnection='auto')
output_Ports_35.inputPorts[1].configure(name='DownloadSaveDir_output')
## configure MacroNode input ports
GromosCluster_33.inputPorts[0].configure(
name='GROMOS_ClusterFiles_kryptonite_nbcr_net_traj')
GromosCluster_33.inputPorts[0].configure(datatype='string')
GromosCluster_33.inputPorts[1].configure(
name='GROMOS_ClusterFiles_kryptonite_nbcr_net_active')
GromosCluster_33.inputPorts[1].configure(datatype='string')
GromosCluster_33.inputPorts[2].configure(
name='GROMOS_ClusterFiles_kryptonite_nbcr_net_rmsd')
GromosCluster_33.inputPorts[2].configure(datatype='string')
GromosCluster_33.inputPorts[3].configure(name='DownloadSaveDir_path')
GromosCluster_33.inputPorts[3].configure(datatype='string')
## configure MacroNode output ports
GromosCluster_33.outputPorts[0].configure(
name='DownloadSaveDir_output')
GromosCluster_33.outputPorts[0].configure(datatype='string')
GromosCluster_33.shrink()
## reset modifications ##
GromosCluster_33.resetTags()
GromosCluster_33.buildOriginalList()