def test_internal_bad_args(self):
with self.assertRaisesRegexp(IndexError,
"method index is out of range"):
_chemfp.get_method_name(-1)
with self.assertRaisesRegexp(IndexError,
"method index is out of range"):
_chemfp.get_method_name(_chemfp.get_num_methods())
def get_alignment_methods():
settings = {}
for alignment in range(_chemfp.get_num_alignments()):
method = _chemfp.get_alignment_method(alignment)
settings[_chemfp.get_alignment_name(
alignment)] = _chemfp.get_method_name(method)
return settings
def get_alignment_method(alignment):
try:
alignment_i = get_alignments().index(alignment)
except ValueError:
raise ValueError("Unknown alignment %r" % (alignment,))
return _chemfp.get_method_name(_chemfp.get_alignment_method(alignment_i))
def get_alignment_methods():
settings = {}
for alignment in range(_chemfp.get_num_alignments()):
method = _chemfp.get_alignment_method(alignment)
settings[_chemfp.get_alignment_name(alignment)] = _chemfp.get_method_name(method)
return settings
def get_methods():
return [_chemfp.get_method_name(i) for i in range(_chemfp.get_num_methods())]
def test_internal_bad_args(self):
with self.assertRaisesRegexp(IndexError, "method index is out of range"):
_chemfp.get_method_name(-1)
with self.assertRaisesRegexp(IndexError, "method index is out of range"):
_chemfp.get_method_name(_chemfp.get_num_methods())
def get_alignment_method(alignment):
try:
alignment_i = get_alignments().index(alignment)
except ValueError:
raise ValueError("Unknown alignment %r" % (alignment,))
return _chemfp.get_method_name(_chemfp.get_alignment_method(alignment_i))
def get_methods():
return [_chemfp.get_method_name(i) for i in range(_chemfp.get_num_methods())]
