def test_analysis_pipeline(self):
        test_out_dir = self.set_outputfolder("test_analysis_pipeline")
        ag = AGAnalysis(self.agilepyConf, self.sourcesConfTxt)

        ag.setOptions(tmin = 433857532, tmax = 434289532, timetype = "TT", glon = 263.55, glat = -2.78)
        maplistFilePath = ag.generateMaps()
        self.assertEqual(True, os.path.isfile(maplistFilePath))

        sources = ag.loadSourcesFromCatalog("2AGL", rangeDist = (0, 21))
        sources = ag.freeSources('name == "2AGLJ0835-4514"', "flux", True, show=True)

        products_1 = ag.mle()

        for p in products_1:
            self.assertEqual(True, os.path.isfile(p))

        products_2 = ag.mle()
        for p in products_2:
            self.assertEqual(True, os.path.isfile(p))

        ag.setOptions(tmin = 433857532, tmax = 433907532, timetype = "TT", glon = 263.55, glat = -2.78)

        maplistfile = ag.generateMaps()
        
        products_3 = ag.mle()
        for p in products_3:
            self.assertEqual(True, os.path.isfile(p))
        
        ag.destroy()
    def test_update_source_position(self):

        ag = AGAnalysis(self.agilepyconfPath, self.sourcesconfPath)

        ag.generateMaps()

        ag.freeSources('name == "2AGLJ2021+4029"', "pos", False)

        ag.mle()

        self.assertRaises(ValueError,
                          ag.updateSourcePosition,
                          "2AGLJ2021+4029",
                          useMulti=False)

        changed = ag.updateSourcePosition("2AGLJ2021+4029",
                                          useMulti=False,
                                          glon=78.2375,
                                          glat=2.12298)
        self.assertEqual(False, changed)

        ag.freeSources('name == "2AGLJ2021+4029"', "pos", True)

        ag.mle()

        changed = ag.updateSourcePosition("2AGLJ2021+4029", useMulti=True)
        self.assertEqual(False, changed)

        ag.destroy()
    def test_calc_bkg(self):

        test_out_dir = self.set_outputfolder("test_calc_bkg")


        ag = AGAnalysis(self.agilepyConf, self.sourcesConfTxt)

        ag.setOptions(  timetype="TT",
                        galcoeff=[-1, -1, -1, -1],
                        isocoeff=[10, 12, 10, 12]
                     )

        """
        galBkg, isoBkg, maplistfile = ag.calcBkg('CYGX3', pastTimeWindow=0)
        print("\ngalBkg:",galBkg)
        print("isoBkg:",isoBkg)

        galBkg, isoBkg, maplistfile = ag.calcBkg('CYGX3', galcoeff=[-1,-1,-1,-1], pastTimeWindow=0)
        print("\ngalBkg:",galBkg)
        print("isoBkg:",isoBkg)


        galBkg, isoBkg, maplistfile = ag.calcBkg('CYGX3', galcoeff=[0,0,0,0], pastTimeWindow=0)
        print("\ngalBkg:",galBkg)
        print("isoBkg:",isoBkg)
        """

        galCoeff, isoCoeff, maplistfile = ag.calcBkg(self.VELA, galcoeff=[0.8, 0.6, 0.8, 0.6], pastTimeWindow=0)
       
        self.assertEqual([10, 12, 10, 12], isoCoeff)
        self.assertEqual([0.8, 0.6, 0.8, 0.6], galCoeff)

        ag.destroy()
    def test_setOptionEnergybin(self):

        test_out_dir = self.set_outputfolder("test_setOptionEnergybin")


        energybin0 = [[100, 10000]]
        energybin1 = [[100, 50000]]
        energybin2 = [[100, 300], [300, 1000], [1000, 3000], [3000, 10000]]
        energybin3 = [[100, 300], [300, 1000], [1000, 3000], [3000, 10000], [10000, 50000]]
        energybin4 = [[50, 100], [100, 300], [300, 1000], [1000, 3000], [3000, 10000]]
        energybin5 = [[50, 100], [100, 300], [300, 1000], [1000, 3000], [3000, 10000], [10000, 50000]]

        ag = AGAnalysis(self.agilepyConf)

        self.assertRaises(ValueOutOfRange, ag.setOptionEnergybin, 42)

        ag.setOptionEnergybin(0)
        self.assertEqual(ag.getOption("energybins"), energybin0)

        ag.setOptionEnergybin(1)
        self.assertEqual(ag.getOption("energybins"), energybin1)

        ag.setOptionEnergybin(2)
        self.assertEqual(ag.getOption("energybins"), energybin2)

        ag.setOptionEnergybin(3)
        self.assertEqual(ag.getOption("energybins"), energybin3)

        ag.setOptionEnergybin(4)
        self.assertEqual(ag.getOption("energybins"), energybin4)

        ag.setOptionEnergybin(5)
        self.assertEqual(ag.getOption("energybins"), energybin5)

        ag.destroy()
    def test_lc(self):

        test_out_dir = self.set_outputfolder("test_lc")


        ag = AGAnalysis(self.agilepyConf, self.sourcesConfTxt)

        ag.setOptions(energybins=[[100, 300]], fovbinnumber=1) # to reduce the computational time

        ag.freeSources(lambda name: name == self.VELA, "flux", True)

        lightCurveData = ag.lightCurveMLE(self.VELA, tmin=433860000, tmax=433880000, timetype="TT", binsize=20000)

        self.assertEqual(True, os.path.isfile(lightCurveData))

        with open(lightCurveData, "r") as lcd:
            lines = lcd.readlines()
            # print("readlines: ", lines)
        self.assertEqual(True,len(lines) == 1+1) # 1 header + 2 temporal bins

        lightCurveData = ag.lightCurveMLE(self.VELA, tmin=433900000, tmax=433940000, timetype="TT", binsize=20000)

        self.assertEqual(True, os.path.isfile(lightCurveData))

        with open(lightCurveData, "r") as lcd:
            lines = lcd.readlines()
            # print("readlines: ", lines)
        self.assertEqual(True, len(lines) == 1+2) # 1 header + 3 temporal bins

        lightCurvePlot = ag.displayLightCurve("mle", saveImage=True)
        self.assertEqual(True, os.path.isfile(lightCurvePlot))

        ag.destroy()
    def test_parse_maplistfile(self):

        test_out_dir = self.set_outputfolder("test_parse_maplistfile")


        ag = AGAnalysis(self.agilepyConf, self.sourcesConfTxt)

        ag.setOptions(energybins=[[100,300],[300,1000]], fovbinnumber=2)
        maplistFilePath = ag.generateMaps()

        maplistRows1 = ag.parseMaplistFile()
        maplistRows2 = ag.parseMaplistFile(maplistFilePath)

        self.assertEqual(4, len(maplistRows1))
        self.assertEqual(4, len(maplistRows2))

        for i in range(4):
            for j in range(3):
                self.assertEqual(maplistRows1[i][j], maplistRows2[i][j])

        for i in range(4):
            for j in range(3):
                self.assertEqual(True, os.path.isfile(maplistRows1[i][j]))

        ag.destroy()
    def test_calc_bkg(self):

        ag = AGAnalysis(self.agilepyconfPath, self.sourcesconfPathcalcBkg)

        ag.setOptions(tmin=456461778.0,
                      tmax=456537945.0,
                      timetype="TT",
                      galcoeff=[-1, -1, -1, -1],
                      isocoeff=[10, 12, 10, 12])
        """
        galBkg, isoBkg, maplistfile = ag.calcBkg('CYGX3', pastTimeWindow=0)
        print("\ngalBkg:",galBkg)
        print("isoBkg:",isoBkg)

        galBkg, isoBkg, maplistfile = ag.calcBkg('CYGX3', galcoeff=[-1,-1,-1,-1], pastTimeWindow=0)
        print("\ngalBkg:",galBkg)
        print("isoBkg:",isoBkg)


        galBkg, isoBkg, maplistfile = ag.calcBkg('CYGX3', galcoeff=[0,0,0,0], pastTimeWindow=0)
        print("\ngalBkg:",galBkg)
        print("isoBkg:",isoBkg)
        """

        galBkg, isoBkg, maplistfile = ag.calcBkg('CYGX3',
                                                 galcoeff=[0.8, 0.6, 0.8, 0.6],
                                                 pastTimeWindow=0)
        print("\ngalBkg:", galBkg)
        print("isoBkg:", isoBkg)

        ag.destroy()
    def test_setDQ(self):

        test_out_dir = self.set_outputfolder("test_setDQ")


        ag = AGAnalysis(self.agilepyConf)

        # dq out of range
        self.assertRaises(ConfigurationsNotValidError, ag.setOptions, dq=42)

        # dq = 0
        ag.setOptions(dq=0, albedorad=101, fovradmax=102)
        self.assertEqual(ag.getOption("albedorad"), 101)
        self.assertEqual(ag.getOption("fovradmax"), 102)

        # dq == 5 
        ag.setOptions(dq=5)
        self.assertEqual(ag.getOption("albedorad"), 100)
        self.assertEqual(ag.getOption("fovradmax"), 50)
        
        # Try to change albedorad or fovradmax with dq == 5
        self.assertRaises(CannotSetNotUpdatableOptionError,
                          ag.setOptions, albedorad=42, fovradmax=42)

        ag.destroy()
    def test_source_dist_updated_after_mle(self):

        test_out_dir = self.set_outputfolder("test_source_dist_updated_after_mle")


        ag = AGAnalysis(self.agilepyConf, self.sourcesConfTxt)

        maplistFilePath = ag.generateMaps()

        ag.freeSources(lambda name: name == self.VELA, "pos", True)
        ag.freeSources(lambda name: name == self.VELA, "flux", True)

        source = ag.selectSources(lambda name: name == self.VELA).pop()
        print(source)
        dist_before = source.get("dist")["value"]

        ag.mle(maplistFilePath)

        source = ag.selectSources(lambda name: name == self.VELA).pop()
        print(source)
        dist_after = source.get("dist")["value"]
        multiDist_after = source.get("multiDist")["value"]

        assert dist_before == dist_after
        assert multiDist_after != dist_after

        ag.destroy()
    def test_fixed_parameters(self):

        test_out_dir = self.set_outputfolder("test_fixed_parameters")


        ag = AGAnalysis(self.agilepyConf)

        ag.setOptions(
            energybins=[[100, 1000]], tmin=434279000,
            tmax=434289532,
            timetype="TT")

        sources = ag.loadSourcesFromCatalog("2AGL", rangeDist=(0, 25))
        
        assert len(sources) == 9

        source = ag.selectSources('name == "2AGLJ0835-4514"').pop()

        flux0 = source.spectrum.getVal("flux")
        
        sources = ag.freeSources(
            'name == "2AGLJ0835-4514"', "flux", False, show=True)

        _ = ag.generateMaps()

        _ = ag.mle()
        
        flux1 = source.get("multiFlux")["value"]

        assert flux0 == flux1

        ag.destroy()
    def test_update_source_parameter_value(self):

        test_out_dir = self.set_outputfolder("test_update_source_parameter_value")


        ag = AGAnalysis(self.agilepyConf, self.sourcesConfTxt)

        sources = ag.selectSources(lambda name: name == self.VELA)
        
        source = sources.pop()

        self.assertEqual(1.34774, source.spectrum.getVal("index2"))
        source.set("index2", {"value": 1})
        assert 1 == source.spectrum.getVal("index2")

        self.assertEqual(969.539e-08, source.spectrum.getVal("flux"))
        source.set("flux", {"value": 1})
        assert 1 == source.spectrum.getVal("flux")

        self.assertEqual(3913.06, source.spectrum.getVal("cutoffEnergy"))
        source.set("cutoffEnergy", {"value": 1})
        assert 1 == source.spectrum.getVal("cutoffEnergy")

        # self.assertRaises(AttributeError, source.spectrum.get, "index")
        # self.assertRaises(AttributeError, source.spectrum.set, "index", 10)

        ag.destroy()
    def test_extract_light_curve_data(self):

        test_out_dir = self.set_outputfolder("test_extract_light_curve_data")


        ag = AGAnalysis(self.agilepyConf, self.sourcesConfTxt)

        sourceFile = Path(self.currentDirPath).joinpath("data/testcase_2AGLJ0835-4514.source")

        lcdata = ag._extractLightCurveDataFromSourceFile(str(sourceFile))


        lcdataKeys = ["sqrt(ts)", "flux","flux_err", "flux_ul","gal","gal_error","iso","iso_error",\
            "l_peak","b_peak","dist_peak","l","b","r","ell_dist","a","b","phi","exp","ExpRatio","counts",\
            "counts_err","Index","Index_Err","Par2","Par2_Err","Par3","Par3_Err","Erglog","Erglog_Err","Erglog_UL",\
            "time_start_tt","time_end_tt","Fix","index","ULConfidenceLevel","SrcLocConfLevel","start_l","start_b",\
            "start_flux","typefun","par2","par3","galmode2","isomode2","isomode2fit","edpcor","fluxcor",\
            "integratortype","expratioEval","expratio_minthr","expratio_maxthr","expratio_size",\
            "emin", "emax", "fovmin", "fovmax", "albedo", "binsize", "expstep", "phasecode", "fit_cts", \
            "fit_fitstatus0", "fit_fcn0", "fit_edm0", "fit_nvpar0", "fit_nparx0", "fit_iter0", \
            "fit_fitstatus1", "fit_fcn1", "fit_edm1", "fit_nvpar1", "fit_nparx1", "fit_iter1", "fit_Likelihood1"]

        self.assertEqual(len(lcdataKeys), len(lcdata))
        
        for key in lcdataKeys:
            self.assertEqual(True, key in lcdata)

        ag.destroy()
    def test_generate_maps(self):

        test_out_dir = self.set_outputfolder("test_generate_maps")

        ag = AGAnalysis(self.agilepyConf, self.sourcesConfTxt)

        ag.setOptions(tmin=433857532, tmax=433858532, timetype="TT")

        outDir = ag.getOption("outdir")

        maplistFilePath0 = ag.generateMaps()
        self.assert_maplistfile_lines_number(maplistFilePath0, 4)
        outDir0 = Path(outDir).joinpath("maps", "0")
        self.assertEqual(True, outDir0.is_dir())
        self.assert_generated_maps_number(outDir0, 16)
        self.assert_generated_maps_exist(ag.parseMaplistFile(maplistFilePath0))

        # second generation (same parameters)
        maplistFilePath1 = ag.generateMaps()
        self.assert_maplistfile_lines_number(maplistFilePath1, 4)
        outDir1 = Path(outDir).joinpath("maps", "1")
        self.assertEqual(True, outDir1.is_dir())
        self.assert_generated_maps_number(outDir1, 16)
        self.assert_generated_maps_exist(ag.parseMaplistFile(maplistFilePath1))

        
        # third generation with different time interval
        ag.setOptions(tmin=433957532, tmax=433957632, timetype="TT")
        maplistFilePath2 = ag.generateMaps()
        self.assert_maplistfile_lines_number(maplistFilePath2, 4)
        outDir2 = Path(outDir).joinpath("maps", "2")
        self.assertEqual(True, outDir2.is_dir())        
        self.assert_generated_maps_number(outDir2, 16)
        self.assert_generated_maps_exist(ag.parseMaplistFile(maplistFilePath2))

        # fourth generation with different glon and glat
        ag.setOptions(glon=265, glat=-3, timetype="TT")
        maplistFilePath3 = ag.generateMaps()
        self.assert_maplistfile_lines_number(maplistFilePath3, 4)
        outDir3 = Path(outDir).joinpath("maps", "3")
        self.assertEqual(True, outDir3.is_dir())        
        self.assert_generated_maps_number(outDir3, 16)
        self.assert_generated_maps_exist(ag.parseMaplistFile(maplistFilePath3))


        # fifth generation with different fovbinnumber, and energy range
        ag.setOptions(fovbinnumber=1, energybins=[[100,300]])
        maplistFilePath4 = ag.generateMaps()
        self.assert_maplistfile_lines_number(maplistFilePath4, 1)
        outDir3 = Path(outDir).joinpath("maps", "4")
        self.assertEqual(True, outDir3.is_dir())        
        self.assert_generated_maps_number(outDir3, 4)
        self.assert_generated_maps_exist(ag.parseMaplistFile(maplistFilePath4))

        ag.destroy()
    def test_print_source(self):
        ag = AGAnalysis(self.agilepyconfPath, self.sourcesconfPath)

        maplistFilePath = ag.generateMaps()

        ag.freeSources('name == "2AGLJ2021+3654"', "pos", True)

        ag.mle(maplistFilePath)

        for s in ag.sourcesLibrary.sources:
            print(s)

        self.assertEqual(True, True)

        ag.destroy()
    def test_analysis_pipeline(self):
        ag = AGAnalysis(self.agilepyconfPath, self.sourcesconfPath)

        maplistFilePath = ag.generateMaps()
        self.assertEqual(True, os.path.isfile(maplistFilePath))

        products_1 = ag.mle(maplistFilePath)
        for p in products_1:
            self.assertEqual(True, os.path.isfile(p))

        products_2 = ag.mle(maplistFilePath)
        for p in products_2:
            self.assertEqual(True, os.path.isfile(p))

        ag.destroy()
    def test_fix_exponent(self):

        test_out_dir = self.set_outputfolder("test_fix_exponent")


        ag = AGAnalysis(self.agilepyConf, self.sourcesConfTxt)

        self.assertEqual('894.587e-08', ag._fixToNegativeExponent(8.94587e-06, fixedExponent=-8))
        self.assertEqual('309.757e-08', ag._fixToNegativeExponent(3.09757e-06, fixedExponent=-8))
        self.assertEqual('1623.16e-08', ag._fixToNegativeExponent(1.62316e-05, fixedExponent=-8))
        self.assertEqual('1.524e-08', ag._fixToNegativeExponent(1.524e-8, fixedExponent=-8))
        self.assertEqual('1.524e+18e-08', ag._fixToNegativeExponent(1.524e10, fixedExponent=-8))
        self.assertEqual('0.0', ag._fixToNegativeExponent(0.0, fixedExponent=-8))

        ag.destroy()
    def test_source_Flux_updated_after_mle(self):
        ag = AGAnalysis(self.agilepyconfPath, self.sourcesconfPath)

        maplistFilePath = ag.generateMaps()

        source_1 = ag.selectSources(
            lambda name: name == '2AGLJ2021+3654').pop()
        flux_1 = source_1.spectrum.get("flux")

        ag.mle(maplistFilePath)
        source_2 = ag.selectSources(
            lambda name: name == '2AGLJ2021+3654').pop()
        flux_2 = source_2.multi.get("multiFlux")

        self.assertNotEqual(flux_1, flux_2)

        ag.destroy()
    def test_source_dist_updated_after_source_position_update(self):

        test_out_dir = self.set_outputfolder("test_source_dist_updated_after_source_position_update")


        ag = AGAnalysis(self.agilepyConf, self.sourcesConfTxt)
        ag.setOptions(tmin = 433857532, tmax = 433857542, timetype = "TT", fovbinnumber=1, energybins=[[100,200]], glon = 263.55, glat = -2.78)

        source_1 = ag.selectSources(lambda name: name == self.VELA).pop()
        dist_1 = source_1.spatialModel.get("dist")["value"]

        ag.updateSourcePosition(self.VELA, glon=264, glat=-3)

        source_2 = ag.selectSources(lambda name: name == self.VELA).pop()
        dist_2 = source_2.spatialModel.get("dist")["value"]

        assert True, dist_1 != dist_2
        ag.destroy()
    def test_display_sky_maps_singlemode(self):

        ag = AGAnalysis(self.agilepyconfPath, self.sourcesconfPath)
        _ = ag.generateMaps()

        maps = ag.displayCtsSkyMaps(saveImage=True)
        for m in maps:
            self.assertEqual(True, os.path.isfile(m))

        maps = ag.displayExpSkyMaps(saveImage=True)
        for m in maps:
            self.assertEqual(True, os.path.isfile(m))

        maps = ag.displayGasSkyMaps(saveImage=True)
        for m in maps:
            self.assertEqual(True, os.path.isfile(m))

        ag.destroy()
    def test_generate_maps(self):

        ag = AGAnalysis(self.agilepyconfPath, self.sourcesconfPath)

        outDir = ag.getOption("outdir")

        maplistFilePath = ag.generateMaps()
        self.assertEqual(True, os.path.isfile(maplistFilePath))

        maps = os.listdir(Path(outDir).joinpath("maps"))
        self.assertEqual(16, len(maps))

        lines = None
        with open(maplistFilePath) as mfp:
            lines = mfp.readlines()

        self.assertEqual(4, len(lines))

        ag.destroy()
    def test_source_dist_updated_after_mle(self):
        ag = AGAnalysis(self.agilepyconfPath, self.sourcesconfPath)

        maplistFilePath = ag.generateMaps()

        ag.mle(maplistFilePath)
        source_1 = ag.selectSources(
            lambda name: name == '2AGLJ2021+4029').pop()
        dist_1 = source_1.multi.get("multiDist")

        ag.setOptions(glon=81, glat=1)

        ag.mle(maplistFilePath)
        source_2 = ag.selectSources(
            lambda name: name == '2AGLJ2021+4029').pop()
        dist_2 = source_2.multi.get("multiDist")

        self.assertNotEqual(dist_1, dist_2)

        ag.destroy()
    def test_saving_sky_maps_singlemode(self):

        test_out_dir = self.set_outputfolder("test_saving_sky_maps_singlemode")


        ag = AGAnalysis(self.agilepyConf, self.sourcesConfTxt)
        _ = ag.generateMaps()

        maps = ag.displayCtsSkyMaps(saveImage=True)
        for m in maps:
            self.assertEqual(True, os.path.isfile(m))

        maps = ag.displayExpSkyMaps(saveImage=True)
        for m in maps:
            self.assertEqual(True, os.path.isfile(m))

        maps = ag.displayGasSkyMaps(saveImage=True)
        for m in maps:
            self.assertEqual(True, os.path.isfile(m))

        ag.destroy()
    def test_multi_update_free_parameters(self):

        test_out_dir = self.set_outputfolder("test_multi_update_free_parameters")


        ag = AGAnalysis(self.agilepyConf, self.sourcesConfTxt)

        ag.generateMaps()

        sources = ag.selectSources(lambda name: name == self.VELA)

        source = sources.pop()

        #index2 = source.spectrum.get("index2")
        flux = source.spectrum.getVal("flux")
        #cutoffEnergy = source.spectrum.get("cutoffEnergy") 

        ag.freeSources(lambda name: name == self.VELA, "pos", True)
        # ag.freeSources(lambda name: name == self.VELA, "index2", True)
        ag.freeSources(lambda name: name == self.VELA, "flux", True)
        # ag.freeSources(lambda name: name == self.VELA, "cutoffEnergy", True)
        print(source)

        ag.mle()

        print(source)

        assert source.multiAnalysis.getVal("multiFlux") != source.spectrum.getVal("flux")
        assert flux == source.spectrum.getVal("flux")

        ag.mle()

        assert source.multiAnalysis.getVal("multiFlux") != source.spectrum.getVal("flux")
        assert flux != source.spectrum.getVal("flux")

        print(source)

        #todo: validation test 

        ag.destroy()
    def test_generic_column(self):

        test_out_dir = self.set_outputfolder("g_col")

        ag = AGAnalysis(self.agilepyConf, self.sourcesConfTxt)

        ag.setOptions(energybins=[[100, 300]], fovbinnumber=1)

        ag.freeSources(lambda name: name == self.VELA, "flux", True)

        lightCurveData = ag.lightCurveMLE(
            self.VELA, tmin=433860000, tmax=433880000, timetype="TT", binsize=20000)

        #filename = ag.displayGenericColumns(
        #    lightCurveData, columns=["l_peak"], um=["test_um"], saveImage=True)

        filename = ag.displayGenericColumns(
            lightCurveData, columns=["l_peak", "counts"], um=["test_um", "counts"], saveImage=True)

        self.assertEqual(True, os.path.isfile(filename))

        ag.destroy()
    def test_saving_sky_maps(self):

        test_out_dir = self.set_outputfolder("test_saving_sky_maps")


        ag = AGAnalysis(self.agilepyConf, self.sourcesConfTxt)
        ag.setOptions(tmin = 433857532, tmax = 433857732, timetype = "TT")
        _ = ag.generateMaps()

        maps = ag.displayCtsSkyMaps(singleMode=False, saveImage=True)
        for m in maps:
            self.assertEqual(True, os.path.isfile(m))

        maps = ag.displayExpSkyMaps(singleMode=False, saveImage=True)
        for m in maps:
            self.assertEqual(True, os.path.isfile(m))

        maps = ag.displayGasSkyMaps(singleMode=False, saveImage=True)
        for m in maps:
            self.assertEqual(True, os.path.isfile(m))

        ag.destroy()
    def test_source_flux_updated_after_mle(self):

        test_out_dir = self.set_outputfolder("test_source_flux_updated_after_mle")


        ag = AGAnalysis(self.agilepyConf, self.sourcesConfTxt)

        maplistFilePath = ag.generateMaps()

        ag.freeSources(lambda name: name == self.VELA, "flux", True)

        source_1 = ag.selectSources(lambda name: name == self.VELA).pop()
        
        flux_1 = source_1.get("flux")["value"]

        ag.mle(maplistFilePath)

        source_2 = ag.selectSources(lambda name: name == self.VELA).pop()
        flux_2 = source_2.get("multiFlux")["value"]

        self.assertNotEqual(flux_1, flux_2)

        ag.destroy()
    def test_setOptionTimeMJD(self):

        test_out_dir = self.set_outputfolder("test_setOptionTimeMJD")

        
        ag = AGAnalysis(self.agilepyConf)

        tmin1 = 58030.0
        tmax1 = 58035.0

        tmintt = AstroUtils.time_mjd_to_agile_seconds(tmin1)
        tmaxtt = AstroUtils.time_mjd_to_agile_seconds(tmax1)

        ag.setOptionTimeMJD(tmin=tmin1, tmax=tmax1)

        tmin2 = ag.getOption("tmin")

        tmax2 = ag.getOption("tmax")

        self.assertEqual(tmintt, tmin2)
        self.assertEqual(tmaxtt, tmax2)

        ag.destroy()
    def test_update_gal_iso(self):

        ag = AGAnalysis(self.agilepyconfPath, self.sourcesconfPath)

        outDir = Path(ag.getOption("outdir"))

        ag.config.setOptions(galcoeff=[0.6, 0.8, 0.6, 0.8])
        ag.config.setOptions(isocoeff=[10, 15, 10, 15])

        galcoeffs = ag.config.getOptionValue("galcoeff")
        isocoeffs = ag.config.getOptionValue("isocoeff")

        maplistFilePath = ag.generateMaps()

        matrix = ag.parseMaplistFile()
        for idx, row in enumerate(matrix):
            self.assertEqual(str(galcoeffs[idx]), row[4])
            self.assertEqual(str(isocoeffs[idx]), row[5])

        if outDir.joinpath("maps").exists() and outDir.joinpath(
                "maps").is_dir():
            shutil.rmtree(outDir.joinpath("maps"))

        outDir.joinpath("maps").mkdir(parents=False, exist_ok=True)

        ag.config.setOptions(galcoeff=[0, 0, 0, 0])
        ag.config.setOptions(isocoeff=[0, 0, 0, 0])

        galcoeffs = ag.config.getOptionValue("galcoeff")
        isocoeffs = ag.config.getOptionValue("isocoeff")

        matrix = ag.parseMaplistFile()
        for idx, row in enumerate(matrix):
            self.assertEqual(str(galcoeffs[idx]), row[4])
            self.assertEqual(str(isocoeffs[idx]), row[5])

        ag.destroy()