def setUp1(self, policy):
self.policy = policy
self.natoms = 11
if self.policy.can_permute():
self.permlist = [range(self.natoms)]
else:
self.permlist = None
self.measure = MeasureCartesian(self.permlist)
self.align = AlignClusterSimple(self.policy, self.measure)
self.transform_list = []
if self.policy.can_invert():
self.transform_list.append(utils.invert)
if self.policy.can_translate():
self.transform_list.append(utils.translate_randomly)
if self.policy.can_rotate():
self.transform_list.append(utils.rotate_randomly)
if self.policy.can_permute():
self.transform_list.append(self.permute_randomly)
