def growth_wheat():
seq, weather = sample_weather()
wdata = weather.get_weather(seq)
nsect = 1 #the number of element per leaf
adel = AdelWheat(nsect=nsect, nplants=1, seed=2)
# age=900に固定
g = adel.setup_canopy(900)
adel.grow(g, wdata)
# csv保存
with open('label.csv', 'w') as f:
writer = csv.writer(f)
label = g.property('label')
geometry = g.property('geometry')
is_green = g.property('is_green')
writer.writerow([label])
writer.writerow([geometry])
writer.writerow([is_green])
f.close()
# 茎，緑葉，茶葉，全体を生成して保存
for i in range(0, 4, 1):
st = plot3d1(g, i)
for t in range(len(st)):
st[t].name = str(t)
# 自動的に.mtlも保存してくれるっぽい
st.save("./" + "compare/" + str(i) + "/nsect" + str(nsect) + ".obj")
st = plot3d1(g, 4)
w = obj.ObjCodec()
w.write2("./compare/1/aa.obj", st)
def test_fake_dss():
seq, weather=sample_weather()
risk = contamination_risk(weather, seq)
assert risk == 0
seq = date_range('2000-10-01', '2000-10-05', freq='H', tz='utc')
risk = contamination_risk(weather, seq)
assert risk == 46
def growth_wheat_someage():
seq, weather = sample_weather()
wdata = weather.get_weather(seq)
nsect = 1 #the number of element per leaf
adel = AdelWheat(nsect=nsect, nplants=1, seed=2)
# save_dir = './obj'
# save_dir = '/home/demo/document/ykato_git/datasets/omg_instance_segmentation/dataset_ver4/obj'
if os.name == 'nt':
save_dir = 'I:/ykato_git/datasets/omg_instance_segmentation/dataset_ver4/obj'
else:
save_dir = '/home/demo/document/ykato_git/datasets/omg_instance_segmentation/dataset_ver4/obj'
makeDirectory(save_dir)
for age in range(100, 1100, 100):
g = adel.setup_canopy(age)
adel.grow(g, wdata)
# パラメータcsv保存
with open(save_dir + '/param_age{}.csv'.format(age), 'w') as f:
writer = csv.writer(f)
label = g.property('label')
geometry = g.property('geometry')
is_green = g.property('is_green')
writer.writerow([label])
writer.writerow([geometry])
writer.writerow([is_green])
f.close()
# 茎，緑葉，茶葉，全体, 葉を生成して保存
folder_name = [
'all', 'stem', 'leaf', 'green_stem', 'green_leaf', 'brown_stem',
'brown_leaf'
]
for i in range(len(folder_name)):
makeDirectory(save_dir + '/' + folder_name[i] + '_age' + str(age))
st = plot3d1(g, i)
for t in range(len(st)):
st[t].name = str(t)
# 自動的に.mtlも保存してくれるっぽい
st.save(save_dir + '/' + folder_name[i] + '_age' + str(age) +
'.obj')
# if i != 3:
w = obj.ObjCodec()
w.write2(save_dir + '/' + folder_name[i] + '_age' + str(age), st)
def growth_wheat_someage():
seq, weather = sample_weather()
wdata = weather.get_weather(seq)
nsect = 1 #the number of element per leaf
for sed in range(100):
adel = AdelWheat(nsect=nsect, nplants=1, seed=sed)
# save_dir = './obj'
# save_dir = '/home/demo/document/ykato_git/datasets/omg_instance_segmentation/dataset_ver4/obj'
if os.name == 'nt':
save_dir = 'I:/ykato_git/datasets/omg_instance_segmentation/dataset_simulate_100/{}'.format(
sed)
else:
save_dir = '/home/demo/document/ykato_git/datasets/omg_instance_segmentation/dataset_ver4/obj'
makeDirectory(save_dir)
for age in range(100, 1100, 100):
g = adel.setup_canopy(age)
adel.grow(g, wdata)
# パラメータcsv保存
with open(save_dir + '/param_age{}.csv'.format(age), 'w') as f:
# writer=csv.writer(f)
label = [g.property('label')]
geometry = [g.property('geometry')]
is_green = [g.property('is_green')]
# writer.writerow([label])
# writer.writerow([geometry])
# writer.writerow([is_green])
header = label[0].keys()
writer = csv.DictWriter(f, header)
# header_row = {'j':k for k in header}
writer.writeheader()
for row in label:
writer.writerow(row)
header = geometry[0].keys()
writer = csv.DictWriter(f, header)
# header_row = {'k':k for k in header}
# writer.writerow(header_row)
writer.writeheader()
for row in geometry:
writer.writerow(row)
header = is_green[0].keys()
writer = csv.DictWriter(f, header)
# header_row = {'k':k for k in header}
# writer.writerow(header_row)
writer.writeheader()
for row in is_green:
writer.writerow(row)
# 茎，緑葉，茶葉，全体, 葉を生成して保存
folder_name = [
'all', 'stem', 'leaf', 'green_stem', 'green_leaf',
'brown_stem', 'brown_leaf'
]
for i in range(len(folder_name)):
makeDirectory(save_dir + '/' + folder_name[i] + '_age' +
str(age))
st = plot3d1(g, i)
for t in range(len(st)):
st[t].name = str(t)
# 自動的に.mtlも保存してくれるっぽい
st.save(save_dir + '/' + folder_name[i] + '_age' + str(age) +
'.obj')
# if i != 3:
w = obj.ObjCodec()
w.write2(save_dir + '/' + folder_name[i] + '_age' + str(age),
st)
from alinea.adel.astk_interface import AdelWheat from alinea.astk.Weather import sample_weather seq, weather = sample_weather() wdata = weather.get_weather(seq) adel = AdelWheat(nsect=2) g = adel.setup_canopy(100) adel.grow(g, wdata)
from alinea.adel.astk_interface import AdelWheat from alinea.astk.Weather import sample_weather seq, weather = sample_weather() wdata = weather.get_weather(seq) adel = AdelWheat(nsect=2) g = adel.setup_canopy(100) adel.grow(g, wdata)