def get_start_end_timestamps(year, month):
"""Generate start and end time unix timestamps for dbsubsets.
Args:
year (int): ending year in integer format
month (int): ending month in integer format
Returns:
tuple (int, int): tuple containing the unix start time and end time
"""
logger = logging.getLogger(__name__)
logger.debug("month:%s", month)
logger.debug("year:%s", year)
month = int(month)
year = int(year)
next_year = year
next_month = month + 1
if next_month > 12:
next_month = 1
next_year = next_year + 1
logger.debug("next_month: %s", next_month)
logger.debug("next_year: %s", next_year)
start_time = stock.str2epoch("%02d/01/%4d 00:00:00" % (month, year))
end_time = stock.str2epoch("%02d/01/%4d 00:00:00" %
(next_month, next_year))
logger.info("START:%s => %s", start_time, stock.strdate(start_time))
logger.info("END:%s => %s", end_time, stock.strdate(end_time))
return start_time, end_time
def month_resolver(self, start_mth, start_yr, end_mth, end_yr, dbname_template):
"""Month list
"""
if self.include_times:
months = {}
else:
months = []
vol_month = start_mth
vol_year = start_yr
while vol_year <= end_yr or (vol_year == end_yr and vol_month <= end_mth):
voltime = antstock.str2epoch("%d/1/%d" % (vol_month, vol_year))
if vol_month < 12:
vol_month += 1
else:
vol_month = 1
vol_year += 1
volendtime = antstock.str2epoch("%d/1/%d" % (vol_month,vol_year)) - 1
dbname = antstock.epoch2str(int(voltime), dbname_template)
if self.include_times:
months[dbname] = (voltime,volendtime)
else:
months.append(dbname)
#if os.path.exists(dbname) and os.path.isfile(dbname):
# if self.include_times:
# months[dbname] = (voltime,volendtime)
# else:
# months.append(dbname)
#else:
# antelog.notify("Dbpath '%s' does not exist." % dbname)
return months
def generate_times(year, month):
"""Generate start and end time unix timestamps for dbsubsets """
month=int(month)
year=int(year)
next_month = (month + 1) % 12
next_year = year + 1 if next_month==1 else year
start_time = str2epoch('%d-%02d-01 00:00' % (year, month))
end_time = str2epoch('%d-%02d-01 00:00' % (next_year, next_month))
return start_time, end_time
def _get_chanperf(self):
self.logging.debug("_get_chanperf()")
today = stock.str2epoch(str(stock.yearday(stock.now())))
lastmonth = today - (86400 * int(self.perf_days_back))
month = {}
week = {}
fields = ["snet", "sta", "chan", "time", "perf"]
steps = ["dbopen chanperf", "dbjoin -o snetsta", "dbsubset time >= %s" % lastmonth]
if self.perf_subset:
steps.append("dbsubset %s" % self.perf_subset)
for v in extract_from_db(self.perf_db, steps, fields, self.db_subset):
snet = v.pop("snet")
sta = v.pop("sta")
chan = v.pop("chan")
fullname = "%s.%s.%s" % (snet, sta, chan)
self.logging.debug("_get_chanperf(%s_%s)" % (snet, sta))
if self._verify_cache(snet, sta, "chanperf"):
try:
if len(self.cache[snet][sta]["chanperf"][chan]) < 1:
raise
except:
self.cache[snet][sta]["chanperf"][chan] = {}
# v['time'] = readable_time( v['time'], '%Y-%m-%d' )
v["time"] = int(v["time"])
self.cache[snet][sta]["chanperf"][chan][v["time"]] = v["perf"]
def _get_chanperf(self):
self.logger.debug("_get_chanperf()")
today = stock.str2epoch(str(stock.yearday(stock.now())))
lastmonth = today - (86400 * int(self.perf_days_back))
fields = ["snet", "sta", "chan", "time", "perf"]
steps = [
"dbopen chanperf",
"dbjoin -o snetsta",
"dbsubset time >= %s" % lastmonth,
]
if self.perf_subset:
steps.append("dbsubset %s" % self.perf_subset)
for v in extract_from_db(self.perf_db, steps, fields, self.db_subset):
snet = v.pop("snet")
sta = v.pop("sta")
chan = v.pop("chan")
self.logger.debug("_get_chanperf(%s_%s)" % (snet, sta))
if self._verify_cache(snet, sta, "chanperf"):
try:
if len(self.cache[snet][sta]["chanperf"][chan]) < 1:
raise
except Exception:
self.cache[snet][sta]["chanperf"][chan] = {}
# v['time'] = readable_time( v['time'], '%Y-%m-%d' )
v["time"] = int(v["time"])
self.cache[snet][sta]["chanperf"][chan][v["time"]] = v["perf"]
def _get_chanperf(self):
self.logging.debug( "_get_chanperf()")
today = stock.str2epoch( str(stock.yearday( stock.now() )) )
lastmonth = today - (86400 * int(self.perf_days_back))
month = {}
week = {}
fields = ['snet','sta','chan','time','perf']
steps = [ 'dbopen chanperf', 'dbjoin -o snetsta',
'dbsubset time >= %s' % lastmonth ]
if self.perf_subset:
steps.append ( 'dbsubset %s' % self.perf_subset )
for v in extract_from_db(self.perf_db, steps, fields, self.db_subset):
snet = v.pop('snet')
sta = v.pop('sta')
chan = v.pop('chan')
fullname = "%s.%s.%s" % ( snet, sta, chan )
self.logging.debug( "_get_chanperf(%s_%s)" % (snet,sta) )
if self._verify_cache(snet,sta,'chanperf'):
try:
if len( self.cache[snet][sta]['chanperf'][chan] ) < 1: raise
except:
self.cache[snet][sta]['chanperf'][chan] = {}
#v['time'] = readable_time( v['time'], '%Y-%m-%d' )
v['time'] = int( v['time'] )
self.cache[snet][sta]['chanperf'][chan][ v['time'] ] = v['perf']
def __init__(self,evid,yr,mon,day,hr,mins,sec,lon,lat,dep,mag):
self.id=evid; #event id
self.year=yr; self.month=mon; self.day=day; #event time
self.hour=hr; self.min=mins; self.sec=sec; #more event time
self.lon=lon; self.lat=lat; self.depth=dep #event location
self.mag=mag; #event magnitude
#Calculate epoch time
str_date=str(mon)+'/'+str(day)+'/'+str(yr)+' '+str(hr)+':'+str(mins)+':'+str(sec)
self.epoch=str2epoch(str_date) #time in seconds after 1/1/1970
self.arrivals=list() #This will be a list of phase arrivals
def year_resolver(self, start_yr, end_yr, dbname_template):
"""Year list """
if self.include_times:
years = {}
else:
years = []
for y in range(start_yr, end_yr + 1):
voltime = antstock.str2epoch("1/1/%s 00:00:00" % y)
volendtime = antstock.str2epoch("12/31/%s 23:59:59" % y)
dbname = antstock.epoch2str(voltime, dbname_template)
if self.include_times:
years[dbname] = (voltime,volendtime)
else:
years.append(dbname)
#if os.path.exists(dbname) and os.path.isfile(dbname):
# if self.include_times:
# years[dbname] = (voltime,volendtime)
# else:
# years.append(dbname)
#else:
# antelog.notify("Dbpath '%s' does not exist." % dbname)
return years
def __init__(self, evid, yr, mon, day, hr, mins, sec, lon, lat, dep,
mag):
self.id = evid
#event id
self.year = yr
self.month = mon
self.day = day
#event time
self.hour = hr
self.min = mins
self.sec = sec
#more event time
self.lon = lon
self.lat = lat
self.depth = dep #event location
self.mag = mag
#event magnitude
#Calculate epoch time
str_date = str(mon) + '/' + str(day) + '/' + str(yr) + ' ' + str(
hr) + ':' + str(mins) + ':' + str(sec)
self.epoch = str2epoch(str_date) #time in seconds after 1/1/1970
self.arrivals = list() #This will be a list of phase arrivals
def main():
########################
# Get information from execution flags
########################
(input, pfname) = configure()
########################
# Get information from parameter file
########################
(tstep, tpad, filter, sta, chan, animation_params, gmt_params) = get_pf(pfname)
########################
# Set start and end time for animation
########################
tstart = float(stock.str2epoch(input.ts))
if input.ts is "now":
tstart = tstart - (tstart % (input.twin)) - input.twin
tend = tstart + float(input.twin)
########################
# Open waveform database
########################
if not input.dbname:
f = '%Y_%m_%d'
date = stock.epoch2str(tstart,f)
db = ds.dbopen("/aerun/op/run/db/archive_%s" % date, "r")
else:
db = ds.dbopen(input.dbname, "r")
########################
# Setup format for creating timestamp on GMT plots
########################
f = '%D %H:%M:%S %Z'
timestamp = stock.epoch2str(tstart, f, "")
## For state-wide
pstextstring = "-153 53 10 0 1 0 %s" % timestamp
## For Anchorage
#pstextstring = "-150 53 10 0 1 0 %s" % timestamp
current_time = tstart
while current_time < tend:
########################
# Get waveform data, compute PGA, and make GMT plot
########################
run_gmt(sta, chan, db, current_time, filter, tstep, tpad, gmt_params, input.verbose)
########################
# Make a timestamp every 10 seconds on the GMT plot
########################
if (current_time%10 == 0):
timestamp = stock.epoch2str(current_time, f, "")
## For state-wide
pstextstring = "-160 51 10 0 1 0 %s" % timestamp
# For Anchorage
#pstextstring = "-150.1 61.04 10 0 1 0 %s" % timestamp
print "Processing time %s" % timestamp
#os.system("echo %s | pstext -R -J -Gblack -P -O -K >> ~/Development/scratch/realtime_gmv/regions_%s.ps" % (pstextstring,current_time))
# 3-d
os.system("echo %s | pstext -R -J -E200/40 -Gblack -P -O -K >> ~/Development/scratch/realtime_gmv/regions_%s.ps" % (pstextstring,current_time))
else:
#os.system("echo %s | pstext -R -J -Gblack -P -O -K >> ~/Development/scratch/realtime_gmv/regions_%s.ps" % (pstextstring,current_time))
# 3-d
os.system("echo %s | pstext -R -J -E200/40 -Gblack -P -O -K >> ~/Development/scratch/realtime_gmv/regions_%s.ps" % (pstextstring,current_time))
########################
# Plot scalebar
########################
## For state-wide
#os.system("psscale -D4.1i/0.9i/1.0i/.20i -C%s -B:\"PGA (ug)\": -L0.0 -P -O >> ~/Development/scratch/realtime_gmv/regions_%s.ps" % (gmt_params['cptfile'], current_time) )
## For Anchorage
#os.system("psxy /Users/mgardine/Development/GMT/alaska_roads.xy -J -R -m -W2,darkgrey -K -O >> ~/Development/scratch/realtime_gmv/regions_%s.ps" % current_time )
#os.system("psscale -D3.8i/0.7i/1.0i/.20i -C%s -B:\"PGA (mg)\": -L0.0 -P -O >> ~/Development/scratch/realtime_gmv/regions_%s.ps" % (gmt_params['cptfile'], current_time) )
current_time += tstep
########################
# Make animated .GIF, remove temporary GMT plots
########################
print "Making animation"
## For state-wide
os.system("/opt/local/bin/gm convert -density 200% -delay 10 -loop 0 -resize 1280x1280 +map ~/Development/scratch/realtime_gmv/regions*.ps ~/Development/scratch/realtime_gmv/animation.gif")
os.system("convert ~/Development/scratch/realtime_gmv/animation.gif -layers OptimizeTransparency -crop 720x720+163+300 +repage ~/Development/scratch/realtime_gmv/animation1.gif")
## For Anchorage
#os.system("/opt/local/bin/gm convert -density 200% -delay 10 -loop 0 -resize 1280x1280 +map ~/Development/scratch/realtime_gmv/regions*.ps ~/Development/scratch/realtime_gmv/animation.gif")
#os.system("convert ~/Development/scratch/realtime_gmv/animation.gif -layers OptimizeTransparency -crop 720x580+163+245 +repage ~/Development/scratch/realtime_gmv/animation1.gif")
#os.system("rm -f ~/Development/scratch/realtime_gmv/regions_*.ps ~/Development/scratch/realtime_gmv/animation.gif")
#os.system("mv ~/Development/scratch/realtime_gmv/animation1.gif %s/animation_rt.gif" % animation_params['webdir'])
#os.system("ffmpeg -i ~/Development/scratch/realtime_gmv/animation1.gif -c:v libvpx -crf 12 ~/Development/scratch/realtime_gmv/animation.webm")
db.close()
def comp(self, arg):
"""Run cross-correlation and select rotation azimuth."""
# Load main database
try:
self.db = datascope.dbopen(self.databasename, "r+")
except Exception as e:
self.logger.error("Problems opening database: %s %s" %
(self.db, e))
# If origin mode, get origin data
if self.origin:
event_data = Origin(self.db, arg)
time = event_data.time
orid = event_data.orid
else:
time = arg
if isinstance(time, str):
time = str2epoch(time)
event_data = None
orid = None
# Grab station info from select list that are active during this time
site_table = Site(self.db)
site_table.get_stations(self.ref_regex, time, event_data=event_data)
try:
reference = list(site_table.stations.keys())[0]
except IndexError:
self.logger.error("No stations found in site table.")
return None
stations = site_table.get_stations(self.comp_regex, time, reference,
event_data)
ref_chan = stations[reference].chans[0]
options = types.SimpleNamespace()
# Get station parameters based on station-event distance
if stations[reference].delta:
delta = stations[reference].delta
if delta >= 0 and delta < 5:
distance = 5
elif delta >= 5 and delta < 20:
distance = 20
elif delta >= 20 and delta < 50:
distance = 50
elif delta >= 50 and delta < 100:
distance = 100
elif delta >= 100 and delta < 180:
distance = 180
self._parse_sta_params(distance, options)
# Inititiate waveform data class
data = Waveforms(self.db)
results = {}
if stations[reference].ptime:
start = stations[reference].ptime - 2
else:
start = time
# Get reference sensor data
ref_tr = data.get_waveforms(
sta=reference,
chan=ref_chan,
start=start,
tw=self.tw,
bw_filter=self.filter,
debug_plot=self.debug_plot,
)
if ref_tr:
data.set_ref_data(reference, ref_tr)
else:
self.logger.notify("No data for reference station %s available" %
reference)
for sta in stations:
results[sta] = {}
# for each comparison, get trace
for chan in stations[sta].chans:
if chan == ref_chan and sta == reference:
pass
else:
tr = data.get_waveforms(
sta=sta,
chan=chan,
start=start,
tw=self.tw,
bw_filter=self.filter,
debug_plot=self.debug_plot,
)
if tr:
if event_data:
diff_esaz = stations[sta].esaz - stations[
reference].esaz
# Do not run if station-station azimuth is too far
if diff_esaz > 45 and diff_esaz < 315:
self.logger.info(
"Event-station azimuth difference %s > \
45 degrees. Station %s thrown out." %
(diff_esaz, sta))
if not self.nosave:
save_results(
ref_sta=self.reference,
ref_chan=stations[reference].chans[0],
sta=sta,
chan=chan,
result_dir=self.result_dir,
ref_esaz=stations[reference].esaz,
ssaz=stations[sta].ssaz,
distance=stations[sta].ssdistance,
esaz=stations[sta].esaz,
azimuth1="NULL",
azimuth2="NULL",
)
# Otherwise, calculate rotation azimuth
else:
results[sta][chan] = data.get_azimuth(sta, tr)
if not self.nosave:
save_results(
ref_sta=reference,
ref_chan=stations[reference].chans[0],
sta=sta,
chan=chan,
result_dir=self.result_dir,
ref_esaz=stations[reference].esaz,
ssaz=stations[sta].ssaz,
distance=stations[sta].ssdistance,
esaz=stations[sta].esaz,
azimuth1=results[sta][chan]
["T"].azimuth,
azimuth2=results[sta][chan]
["R"].azimuth,
)
else:
results[sta][chan] = data.get_azimuth(sta, tr)
if len(results[sta]) > 0 and not self.noplot:
Plot(
width=16,
height=6,
result=results[sta],
reference=data.ref_data,
ref_sta=reference,
ref_chan=ref_chan,
sta=sta,
start=start,
end=start + self.tw,
result_dir=self.result_dir,
debug_plot=self.debug_plot,
orid=orid,
)
return results
"Stations(): No records after sitechan sort.")
sys.exit(reactor.stop())
prog=ProgressLogger("Stations: processing stachan record ",
records, logger=self.logger)
for j in range(records):
prog.tick()
ssc.record = j
try:
sta, chan, ondate, offdate = ssc.getv(
'sta', 'chan', 'ondate', 'offdate')
except Exception, e:
self.logger.exception('Station(): (%s=>%s)' % (Exception,e))
ondate = stock.str2epoch(str(ondate))
if chan in self.wfdisc_stachan[sta]:
if offdate != -1: offdate = stock.str2epoch(str(offdate))
self.stachan_cache[sta][chan]['dates'].extend([[ondate,offdate]])
self.logger.debug("Station(): %s.%s dates: %s" % (
sta,chan,self.stachan_cache[sta][chan]['dates']))
else:
self.logger.debug(
'Station(): %s.%s was not in the wfdisc. Skipping' % (
sta, chan)
)
try:
ssc.free()
endtime = stock.now()
self.logger.debug("endtime=%s" % endtime)
if self.volumes == 'single':
self._test_db(voltime, volendtime, dbname)
elif self.volumes == 'year':
start_year = int(stock.epoch2str(time, "%Y"))
end_year = int(stock.epoch2str(endtime, "%Y"))
for y in range(start_year, end_year + 1):
voltime = stock.str2epoch("1/1/%s 00:00:00" % y)
volendtime = stock.str2epoch("12/31/%s 23:59:59" % y)
dbname = stock.epoch2str(voltime, dbname_template)
self._test_db(voltime, volendtime, dbname)
elif self.volumes == 'month':
start_month = int(stock.epoch2str(time, "%L"))
start_year = int(stock.epoch2str(time, "%Y"))
end_month = int(stock.epoch2str(endtime, "%L"))
end_year = int(stock.epoch2str(endtime, "%Y"))
vol_month = start_month
vol_year = start_year
prog = ProgressLogger("Stations: processing stachan record ",
records,
logger=self.logger)
for j in range(records):
prog.tick()
ssc.record = j
try:
sta, chan, ondate, offdate = ssc.getv(
'sta', 'chan', 'ondate', 'offdate')
except Exception, e:
self.logger.exception('Station(): (%s=>%s)' %
(Exception, e))
ondate = stock.str2epoch(str(ondate))
if chan in self.wfdisc_stachan[sta]:
if offdate != -1: offdate = stock.str2epoch(str(offdate))
self.stachan_cache[sta][chan]['dates'].extend(
[[ondate, offdate]])
self.logger.debug(
"Station(): %s.%s dates: %s" %
(sta, chan, self.stachan_cache[sta][chan]['dates']))
else:
self.logger.debug(
'Station(): %s.%s was not in the wfdisc. Skipping' %
(sta, chan))
try:
def main():
##########
# Extract station list from master_stations
##########
stations = []
with ds.closing(ds.dbopen("/aerun/sum/db/dbsum/dbsum", "r")) as db:
steps = ["dbopen affiliation", "dbjoin site", "dbsubset net=~/AK/ && offdate==NULL", "dbsort sta"]
with ds.freeing(db.process(steps)) as dbview:
for record in dbview.iter_record():
stations.append(record.getv('sta')[0])
##########
# Extract waveform data into trace objects
##########
twin = 600
tcurrent = float(stock.str2epoch('now'))
tend = tcurrent - 60
tstart = tend - twin
f = '%Y_%m_%d'
date = stock.epoch2str(tstart,f)
with ds.closing(ds.dbopen("/aerun/op/run/db/archive_%s" % date, "r")) as db:
for sta in stations:
data = {}
samplerate = {}
dbsta = db.lookup(table = 'wfdisc')
dbsta = dbsta.subset('sta=~/%s/' % sta )
bband = dbsta.subset('chan=~/BH./')
#######
# Extract Broadband seismic data
#######
if bband.query('dbRECORD_COUNT') > 0:
# print (tstart, tcurrent, "%s" % sta, "BHE")
tr_bhe = dbsta.trloadchan(tstart, tend, "%s" % sta, "BHE")
tr_bhe.trapply_calib()
with ds.trfreeing(tr_bhe):
if tr_bhe.query("dbRECORD_COUNT") > 0:
tr_bhe.record = 0
data['BHE'] = tr_bhe.trdata()
samplerate['BHE'] = tr_bhe.getv("samprate")
tr_bhn = dbsta.trloadchan(tstart, tend, "%s" % sta, "BHN")
tr_bhn.trapply_calib()
with ds.trfreeing(tr_bhn):
if tr_bhn.query("dbRECORD_COUNT") > 0:
tr_bhn.record = 0
data['BHN'] = tr_bhn.trdata()
samplerate['BHN'] = tr_bhn.getv("samprate")
tr_bhz = dbsta.trloadchan(tstart, tend, "%s" % sta, "BHZ")
tr_bhz.trapply_calib()
with ds.trfreeing(tr_bhz):
if tr_bhz.query("dbRECORD_COUNT") > 0:
tr_bhz.record = 0
data['BHZ'] = tr_bhz.trdata()
samplerate['BHZ'] = tr_bhz.getv("samprate")
#######
# Extract moderate sample rate strong motion data
#######
smot_b = dbsta.subset('chan=~/BN./')
if smot_b.query('dbRECORD_COUNT') > 0:
tr_bne = dbsta.trloadchan(tstart, tend, "%s" % sta, "BNE")
tr_bne.trapply_calib()
with ds.trfreeing(tr_bne):
if tr_bne.query("dbRECORD_COUNT") > 0:
tr_bne.record = 0
data['BNE'] = tr_bne.trdata()
samplerate['BNE'] = tr_bne.getv("samprate")
tr_bnn = dbsta.trloadchan(tstart, tend, "%s" % sta, "BNN")
tr_bnn.trapply_calib()
with ds.trfreeing(tr_bnn):
if tr_bnn.query("dbRECORD_COUNT") > 0:
tr_bnn.record = 0
data['BNN'] = tr_bnn.trdata()
samplerate['BNN'] = tr_bnn.getv("samprate")
tr_bnz = dbsta.trloadchan(tstart, tend, "%s" % sta, "BNZ")
tr_bnz.trapply_calib()
with ds.trfreeing(tr_bnz):
if tr_bnz.query("dbRECORD_COUNT") > 0:
tr_bnz.record = 0
data['BNZ'] = tr_bnz.trdata()
samplerate['BNZ'] = tr_bnz.getv("samprate")
#######
# Extract high sample rate strong motion data
#######
smot_h = dbsta.subset('chan=~/HN./')
if smot_h.query('dbRECORD_COUNT') > 0:
tr_hne = dbsta.trloadchan(tstart, tend, "%s" % sta, "HNE")
tr_hne.trapply_calib()
with ds.trfreeing(tr_hne):
if tr_hne.query("dbRECORD_COUNT") > 0:
tr_hne.record = 0
data['HNE'] = tr_hne.trdata()
samplerate['HNE'] = tr_hne.getv("samprate")
tr_hnn = dbsta.trloadchan(tstart, tend, "%s" % sta, "HNN")
tr_hnn.trapply_calib()
with ds.trfreeing(tr_hnn):
if tr_hnn.query("dbRECORD_COUNT") > 0:
tr_hnn.record = 0
data['HNN'] = tr_hnn.trdata()
samplerate['HNN'] = tr_hnn.getv("samprate")
tr_hnz = dbsta.trloadchan(tstart, tend, "%s" % sta, "HNZ")
tr_hnz.trapply_calib()
with ds.trfreeing(tr_hnz):
if tr_hnz.query("dbRECORD_COUNT") > 0:
tr_hnz.record = 0
data['HNZ'] = tr_hnz.trdata()
samplerate['HNZ'] = tr_hnz.getv("samprate")
# if sta=="MLY":
# plot_traces(sta, data, tstart, tend, samplerate)
# shortperz = sbsta.subset('chan=~/EHZ/')
# if smot.query('dbRECORD_COUNT') > 0:
# tr_ehz = dbsta.trloadchan(tstart, tcurrent, "%s" % sta, "EHZ")
print sta
plot_traces(sta, data, tstart, tend, samplerate)
def _get_list(self):
try:
db = datascope.dbopen(self.path, "r")
except Exception as e:
raise DbcentralException("Cannot open database %s (%s)" % (self.path, e))
try:
db = db.lookup("", "clusters", "", "")
except datascope.DblookupFieldError:
self.type = "masquerade"
self.nickname = None
self.dbs[self.path] = {"times": [-10000000000.0, 10000000000.0]}
self.logger.info("Not a dbcentral database. Set single database.")
return
else:
self.type = "dbcentral"
if self.nickname is None:
raise ValueError("Need nickname for Dbcentral clustername regex.")
try:
db = db.lookup("", "clusters", "", "dbNULL")
null_time, null_endtime = db.getv("time", "endtime")
except Exception as e:
raise DbcentralException(
"Cannot look up null values in clusters table. (%s)" % e
)
expr = "clustername =='%s'" % self.nickname
try:
db = db.subset(expr)
except Exception as e:
raise DbcentralException("Cannot subset on clustername. %s" % e)
try:
db = db.sort("time")
nclusters = db.record_count
except Exception as e:
raise DbcentralException("Cannot sort on 'time' . %s" % e)
if nclusters < 1:
raise DbcentralException('No matches for nickname "%s".' % self.nickname)
self.logger.debug("Records=%s" % nclusters)
for i in range(nclusters):
self.logger.debug("db.record=%s" % i)
db.record = i
try:
dbname_template = db.extfile()[-1]
except Exception as e:
raise DbcentralException("Cannot run db.extfile(). %s" % e)
self.logger.debug("dbname_template=%s" % dbname_template)
try:
volumes, net, time, endtime = db.getv(
"volumes", "net", "time", "endtime"
)
except Exception as e:
raise DbcentralException(
"Problems with db.getv('volumes','net',"
+ "'time','endtime'). (%s)\n" % e
)
self.logger.debug("volumes=%s" % volumes)
self.logger.debug("net=%s" % net)
self.logger.debug("time=%s" % time)
self.logger.debug("endtime=%s" % endtime)
if endtime == null_endtime:
# This will be problematic with realtime systems
endtime = stock.now()
self.logger.debug("endtime=%s" % endtime)
start_year = int(stock.epoch2str(time, "%Y"))
end_year = int(stock.epoch2str(endtime, "%Y"))
start_month = int(stock.epoch2str(time, "%L"))
end_month = int(stock.epoch2str(endtime, "%L"))
if volumes == "single":
dbname = stock.epoch2str(time, dbname_template)
self._test_db(time, endtime, dbname)
elif volumes == "year":
for y in range(start_year, end_year + 1):
voltime = stock.str2epoch("1/1/%s 00:00:00" % y)
volendtime = stock.str2epoch("12/31/%s 23:59:59" % y)
dbname = stock.epoch2str(voltime, dbname_template)
self._test_db(voltime, volendtime, dbname)
elif volumes == "month":
vol_month = start_month
vol_year = start_year
vol_endmonth = end_month
vol_endyear = end_year
while vol_year < end_year or (
vol_year == end_year and vol_month <= end_month
):
voltime = stock.str2epoch("%d/1/%d" % (vol_month, vol_year))
if vol_month < 12:
vol_month = vol_month + 1
else:
vol_year = vol_year + 1
vol_month = 1
volendtime = (
stock.str2epoch("%d/1/%d" % (vol_endmonth, vol_endyear)) - 1
)
dbname = stock.epoch2str(int(voltime), dbname_template)
self._test_db(voltime, volendtime, dbname)
elif volumes == "day":
start_day = int(stock.yearday(time))
end_day = int(stock.yearday(endtime))
vol_day = start_day
while vol_day <= end_day:
voltime = stock.epoch(vol_day)
volendtime = voltime + 86399 # full day -1 sec
dbname = stock.epoch2str(voltime, dbname_template)
if self._test_db(voltime, volendtime, dbname):
self.dbs[dbname] = {"times": [time, endtime]}
vol_day = stock.yearday((stock.epoch(vol_day) + 86400))
else:
raise UnknownVolumeTypeException(volumes)
self.logger.debug("DBS=%s" % self.dbs.keys())
def _get_stachan_cache(self):
"""Load data into cache."""
records = 0
self.logger.info("Stations(): update cache")
for dbname in self.dbcentral.list():
self.logger.debug("Station(): dbname: %s" % dbname)
dates = {}
query_start_time = time.time()
try:
self.logger.debug("Dbopen " + dbname)
db = datascope.dbopen(dbname, "r")
table = "wfdisc"
field = "time"
self.logger.debug("Dblookup table=%s field=%s" % (table, field))
dbwfdisc = db.lookup(table=table, field=field)
self.logger.debug("Getting record count of " + table)
records = dbwfdisc.query(datascope.dbRECORD_COUNT)
self.mintime = dbwfdisc.ex_eval("min(time)")
self.maxtime = dbwfdisc.ex_eval("max(endtime)")
except Exception as e:
self.logger.exception(
"Problem with wfdisc table. %s: %s" % (Exception, e)
)
sys.exit(reactor.stop())
elapsed_time = time.time() - query_start_time
self.logger.debug(
"Intial dbquery and wfdisc record count took %d seconds" % elapsed_time
)
if self.maxtime > stock.now() or self.maxtime > (stock.now() - 3600):
self.maxtime = -1
self.logger.debug("Starting wfdisc processing of %d records" % records)
prog = ProgressLogger(
"Stations: processing wfdisc record ", records, logger=self.logger
)
for j in range(records):
prog.tick()
dbwfdisc.record = j
try:
sta, chan, dbtime = dbwfdisc.getv("sta", "chan", "time")
self.wfdisc_stachan[sta].add(chan)
self.wfdates[stock.yearday(dbtime)] = 1
except datascope.DatascopeException as e:
self.logger.exception("(%s=>%s)" % (Exception, e))
prog.finish()
self.logger.debug("Stations(): maxtime: %s" % self.maxtime)
self.logger.debug("Stations(): mintime: %s" % self.mintime)
self.logger.debug("Stations(): dates: %s" % dates.keys())
try:
dbsitechan = db.lookup(table="sitechan")
ssc = dbsitechan.sort(["sta", "chan"])
records = ssc.query(datascope.dbRECORD_COUNT)
except Exception as e:
self.logger.exception(
"Stations(): Problems with sitechan table %s: %s" % (Exception, e)
)
sys.exit(reactor.stop())
if not records:
self.logger.critical("Stations(): No records after sitechan sort.")
sys.exit(reactor.stop())
prog = ProgressLogger(
"Stations: processing stachan record ", records, logger=self.logger
)
for j in range(records):
prog.tick()
ssc.record = j
try:
sta, chan, ondate, offdate = ssc.getv(
"sta", "chan", "ondate", "offdate"
)
except Exception as e:
self.logger.exception("Station(): (%s=>%s)" % (Exception, e))
ondate = stock.str2epoch(str(ondate))
if chan in self.wfdisc_stachan[sta]:
if offdate != -1:
offdate = stock.str2epoch(str(offdate))
self.stachan_cache[sta][chan]["dates"].extend([[ondate, offdate]])
self.logger.debug(
"Station(): %s.%s dates: %s"
% (sta, chan, self.stachan_cache[sta][chan]["dates"])
)
else:
self.logger.debug(
"Station(): %s.%s was not in the wfdisc. Skipping" % (sta, chan)
)
try:
ssc.free()
db.close()
except Exception:
pass
prog.finish(level=logging.INFO)
self.logger.info(
"Stations(): Done updating cache (%s) sta-chan pairs."
% len(self.stachan_cache)
)
self.logger.debug( "endtime=%s" % endtime )
start_year = int(stock.epoch2str(time,"%Y"))
end_year = int(stock.epoch2str(endtime,"%Y"))
start_month = int(stock.epoch2str(time,"%L"))
end_month = int(stock.epoch2str(endtime,"%L"))
if volumes == 'single':
self._test_db(voltime,volendtime,dbname)
elif volumes == 'year':
for y in range(start_year,end_year+1):
voltime = stock.str2epoch("1/1/%s 00:00:00" % y)
volendtime = stock.str2epoch("12/31/%s 23:59:59" % y)
dbname = stock.epoch2str(voltime,dbname_template)
self._test_db(voltime,volendtime,dbname)
elif volumes == 'month':
vol_month = start_month
vol_year = start_year
while vol_year < end_year or ( vol_year == end_year and vol_month <= end_month ):
voltime = stock.str2epoch("%d/1/%d" % (vol_month,vol_year) )
if vol_month < 12:
def main():
########################
# Get information from execution flags
########################
(input, pfname) = configure()
########################
# Get information from parameter file
########################
(tstep, tpad, filter, sta, chan) = get_pf(pfname)
########################
# Set start and end time for animation
########################
tstart = float(stock.str2epoch(input.ts))
if input.ts is "now":
tstart = tstart - (tstart % (input.twin)) - input.twin
tend = tstart + input.twin
#tstart = float(stock.str2epoch('8/27/2013 21:40:00'))
#tend = float(stock.str2epoch('8/27/2013 21:50:00'))
#tstart = float(stock.str2epoch('8/25/2013 17:47:00'))
#tend = float(stock.str2epoch('8/25/2013 17:57:00'))
#tstart = float(stock.str2epoch('8/21/2013 18:37:00'))
#tend = float(stock.str2epoch('8/21/2013 18:44:00'))
########################
# Open waveform database
########################
if not input.dbname:
f = '%Y_%m_%d'
date = stock.epoch2str(tstart,f)
db = ds.dbopen("/aerun/op/run/db/archive_%s" % date, "r")
#db = ds.dbopen("/aerun/op/run/db/archive_2013_08_21", "r")
#db = ds.dbopen("/aerun/op/run/db/archive_2013_08_25", "r")
#db = ds.dbopen("/aerun/op/run/db/archive_2013_08_27", "r")
else:
db = ds.dbopen(input.dbname, "r")
########################
# Setup format for creating timestamp on GMT plots
########################
f = '%D %H:%M:%S'
timestamp = stock.epoch2str(tstart, f)
pstextstring = "-153 53 10 0 1 0 %s" % timestamp
current_time = tstart
while current_time < tend:
########################
# Get waveform data, compute PGA, and make GMT plot
########################
run_gmt(sta, chan, db, current_time, filter, tstep, tpad, input.verbose)
########################
# Make a timestamp every 10 seconds on the GMT plot
########################
if (current_time%10 == 0):
timestamp = stock.epoch2str(current_time, f)
pstextstring = "-153 53 10 0 1 0 %s" % timestamp
print "Processing time %s" % timestamp
os.system("echo %s | pstext -R -Jb -Gblack -P -O -K >> ~/Development/scratch/realtime_gmv/regions_%s.ps" % (pstextstring,current_time))
else:
os.system("echo %s | pstext -R -Jb -Gblack -P -O -K >> ~/Development/scratch/realtime_gmv/regions_%s.ps" % (pstextstring,current_time))
########################
# Plot scalebar
########################
os.system("psscale -D4.1i/0.9i/1.0i/.20i -Cwhitered1.cpt -B:\"PGA (ug)\": -L0.0 -P -O >> ~/Development/scratch/realtime_gmv/regions_%s.ps" % current_time)
current_time += tstep
########################
# Make animated .GIF, remove temporary GMT plots
########################
print "Making animation"
os.system("convert -delay 10 -loop 2 ~/Development/scratch/realtime_gmv/regions*.ps ~/Development/scratch/realtime_gmv/animation.gif")
os.system("rm -f ~/Development/scratch/realtime_gmv/regions_*.ps")
os.system("mv ~/Development/scratch/realtime_gmv/animation.gif /usr/local/mosaic/Input/mgardine/animation_rt.gif")
db.close()
