def test_restart_macro(self, init_simple_model):
macro = [
[
'load "model.main.any"',
'classoperation Main.ArmModelStudy.Output.MaxMuscleActivity "Dump"',
'classoperation Main.ArmModel.GlobalRef.t "Dump"',
],
[
'load "model.main.any"',
'classoperation Main.ArmModelStudy.Output.MaxMuscleActivity "Dump"',
'classoperation Main.ArmModel.GlobalRef.t "Dump"',
],
]
app = AnyPyProcess()
output = app.start_macro(macro)
output = app.start_macro()
output[0]["ERROR"] = ["SOME ERROR"]
output = app.start_macro(output)
for result in output:
assert "ERROR" not in result
def test_restart_macro(self, init_simple_model):
macro = [
[
'load "model.main.any"',
'classoperation Main.ArmModelStudy.Output.MaxMuscleActivity "Dump"',
'classoperation Main.ArmModel.GlobalRef.t "Dump"',
],
[
'load "model.main.any"',
'classoperation Main.ArmModelStudy.Output.MaxMuscleActivity "Dump"',
'classoperation Main.ArmModel.GlobalRef.t "Dump"',
],
]
app = AnyPyProcess(return_task_info=True)
output = app.start_macro(macro)
output = app.start_macro()
output[0]["ERROR"] = ["SOME ERROR"]
output = app.start_macro(output)
for result in output:
assert "ERROR" not in result
def test_output_convert_data(self,init_simple_model):
macro = [['load "model.main.any"',
'operation Main.ArmModelStudy.InverseDynamics',
'classoperation Main.ArmModelStudy.Output.MaxMuscleActivity "Dump"',
'classoperation Main.ArmModel.GlobalRef.t "Dump"'],
['load "model.main.any"',
'operation Main.ArmModelStudy.InverseDynamics',
'classoperation Main.ArmModelStudy.Output.MaxMuscleActivity "Dump"',
'classoperation Main.ArmModel.GlobalRef.t "Dump"'],
['load "model.main.any"',
'operation Main.ArmModelStudy.InverseDynamics',
'classoperation Main.ArmModelStudy.Output.MaxMuscleActivity "Dump"',
'classoperation Main.ArmModel.GlobalRef.t "Dump"']]
app = AnyPyProcess(return_task_info=True)
output = app.start_macro(macro)
out1 = output.to_dynd()
assert hasattr(out1, 'Main_ArmModelStudy_Output_MaxMuscleActivity')
assert hasattr(out1, 'Main_ArmModel_GlobalRef_t')
out2 = output.to_dynd( create_nested_structure = True)
assert hasattr(out2, 'Main')
assert hasattr(out2.Main.ArmModel.GlobalRef, 't')
def run_model(DesignVars):
''' Ruturns the x,y potions for the tip of the A frame '''
folder = 'C:/Users/fh/Documents/AAU/PhD-AAU/PhD projekt/OptimeringsArtikle/Scripts/OptimizationStudies'
app = AnyPyProcess(
anybodycon_path=
'C:/Program Files (x86)/AnyBody Technology/AnyBody.6.0/AnyBodyCon.exe',
ignore_errors=['ERROR(OBJ.MCH.MUS6)'])
macro = [[
'load "Optimization.main.any"',
'classoperation Main.DesignVars.sm_rmin "Set Value" --value={:12f}'.
format(DesignVars[0]),
'classoperation Main.DesignVars.sm_rmax "Set Value" --value={:12f}'.
format(DesignVars[1]),
'classoperation Main.DesignVars.sl_rmin "Set Value" --value={:12f}'.
format(DesignVars[2]),
'classoperation Main.DesignVars.sl_rmax "Set Value" --value={:12f}'.
format(DesignVars[3]),
'classoperation Main.DesignVars.gl_rmin "Set Value" --value={:12f}'.
format(DesignVars[4]),
'classoperation Main.DesignVars.gl_rmax "Set Value" --value={:12f}'.
format(DesignVars[5]),
'classoperation Main.DesignVars.gm_rmin "Set Value" --value={:12f}'.
format(DesignVars[6]),
'classoperation Main.DesignVars.gm_rmax "Set Value" --value={:12f}'.
format(DesignVars[7]),
'classoperation Main.DesignVars.fhl_rmin "Set Value" --value={:12f}'.
format(DesignVars[8]),
'classoperation Main.DesignVars.fhl_rmax "Set Value" --value={:12f}'.
format(DesignVars[9]),
'classoperation Main.DesignVars.pr_rmin "Set Value" --value={:12f}'.
format(DesignVars[10]),
'classoperation Main.DesignVars.pr_rmax "Set Value" --value={:12f}'.
format(DesignVars[11]),
'classoperation Main.DesignVars.LocalStrengthFactorPlantarFlexors "Set Value" --value={:12f}'
.format(DesignVars[12]), 'operation Main.RunApplication1', 'run',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.SoleusMedialis1Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.SoleusMedialis2Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.SoleusMedialis3Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.SoleusLateralis1Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.SoleusLateralis2Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.SoleusLateralis3Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.GastrocnemiusLateralis1Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.GastrocnemiusMedialis1Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.FlexorHallucisLongus1Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.FlexorHallucisLongus2Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.FlexorHallucisLongus3Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.PeroneusLongus1Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.PeroneusLongus2Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.PeroneusLongus3Par.Lt0 "Dump"',
'operation Main.RunApplication2', 'run',
'classoperation Main.Studies.ParameterStudies.PlantarFlexorMuscles.IsometricStrength.Output.Strength.Val "Dump"',
'exit'
]]
output = app.start_macro(macro, folderlist=[folder])[0]
return (output)
def test_output_access(self,init_simple_model):
macro = [['load "model.main.any" -def N_STEP="5"',
'operation Main.ArmModelStudy.InverseDynamics',
'classoperation Main.ArmModelStudy.Output.MaxMuscleActivity "Dump"',
'classoperation Main.ArmModel.GlobalRef.t "Dump"']]*5
app = AnyPyProcess(return_task_info=True)
output = app.start_macro(macro)
output['GlobalRef.t']
assert( output['MaxMuscleActivity'].shape == output['Main.ArmModelStudy.Output.MaxMuscleActivity'].shape )
assert( isinstance( output[1:3], AnyPyProcessOutputList ))
def test_start_macro_subdirs(self, tmpdir, default_macro ):
number_of_models = 5
setup_models_in_subdirs(tmpdir, number_of_models)
app = AnyPyProcess(silent=True )
with tmpdir.as_cwd():
output = app.start_macro(default_macro,search_subdirs='main.any')
assert len(output) == number_of_models
for result in output:
assert 'ERROR' not in result
def test_start_macro(self,init_simple_model, default_macro):
app = AnyPyProcess(silent=True)
default_macro[0].extend(['classoperation Main.ArmModelStudy.Output.MaxMuscleActivity "Dump"',
'classoperation Main.ArmModel.GlobalRef.t "Dump"'])
output = app.start_macro(default_macro)
assert len(output) == 1
assert 'Main.ArmModelStudy.Output.MaxMuscleActivity' in output[0]
assert 'Main.ArmModel.GlobalRef.t' in output[0]
assert 'ERROR' not in output[0]
def test_explicit_logfiles_multiple(self, init_simple_model):
logfile = "test.log"
macro = [
['load "model.main.any"', "operation Main.ArmModelStudy.InverseDynamics"],
['load "model.main.any"', "operation Main.ArmModelStudy.InverseDynamics"],
['load "model.main.any"', "operation Main.ArmModelStudy.InverseDynamics"],
]
app = AnyPyProcess(silent=True, keep_logfiles=True, return_task_info=True)
output = app.start_macro(macro, logfile=logfile)
assert os.path.isfile("test_0.log")
assert os.path.isfile("test_1.log")
assert os.path.isfile("test_2.log")
def test_start_macro_multple_folders_and_macros(self, tmpdir, default_macro):
number_of_models = 3
number_of_macros = 3
setup_models_in_subdirs(tmpdir, number_of_models)
folderlist = [str(_) for _ in tmpdir.listdir()]
macrolist = default_macro * number_of_macros
with tmpdir.as_cwd():
app = AnyPyProcess()
output = app.start_macro(macrolist, folderlist)
assert len(output) == len(folderlist) * len(macrolist)
for result in output:
assert "ERROR" not in result
def test_output_access_ragged(self,init_simple_model):
macro = [['load "model.main.any" -def N_STEP="10"',
'operation Main.ArmModelStudy.InverseDynamics',
'classoperation Main.ArmModelStudy.Output.MaxMuscleActivity "Dump"',
'classoperation Main.ArmModel.GlobalRef.t "Dump"'],
['load "model.main.any" -def N_STEP="20"',
'operation Main.ArmModelStudy.InverseDynamics',
'classoperation Main.ArmModelStudy.Output.MaxMuscleActivity "Dump"',
'classoperation Main.ArmModel.GlobalRef.t "Dump"']]
app = AnyPyProcess(return_task_info=True)
output = app.start_macro(macro)
output['GlobalRef.t']
output['MaxMuscleActivity']
def test_output_access(self, init_simple_model):
macro = [[
'load "model.main.any" -def N_STEP="5"',
"operation Main.ArmModelStudy.InverseDynamics",
'classoperation Main.ArmModelStudy.Output.MaxMuscleActivity "Dump"',
'classoperation Main.ArmModel.GlobalRef.t "Dump"',
]] * 5
app = AnyPyProcess()
output = app.start_macro(macro)
output["GlobalRef.t"]
assert (output["MaxMuscleActivity"].shape ==
output["Main.ArmModelStudy.Output.MaxMuscleActivity"].shape)
assert isinstance(output[1:3], AnyPyProcessOutputList)
def test_start_macro_generator_input(self, init_simple_model, default_macro):
n_macros = 5
def generate_macros():
"""Generator that returns macros
"""
for i in range(n_macros):
yield default_macro[0]
app = AnyPyProcess(silent=True)
macros_gen = generate_macros()
output = app.start_macro(macros_gen )
assert len(output) == n_macros
for result in output:
assert 'ERROR' not in result
def test_macro_with_erros(self, init_simple_model, default_macro):
app = AnyPyProcess(
silent=True, return_task_info=True, ignore_errors=["Unresolved object"]
)
macro = [
['load "model.main.any"', "operation Main.ArmModelStudy.InverseDynamics"],
['load "model.main.any"', "operation Main.NonExistentOpeation"],
['load "not_a_model.any"', "operation Main.ArmModelStudy.InverseDynamics"],
]
output = app.start_macro(macro)
assert not "ERROR" in output[0]
assert not "ERROR" in output[1]
assert "ERROR" in output[2]
def test_start_macro_with_task_info(self,init_simple_model, default_macro):
app = AnyPyProcess(silent=True, return_task_info=True)
default_macro[0].extend(['classoperation Main.ArmModelStudy.Output.MaxMuscleActivity "Dump"',
'classoperation Main.ArmModel.GlobalRef.t "Dump"'])
output = app.start_macro(default_macro,)
assert len(output) == 1
assert 'task_macro_hash' in output[0]
assert 'task_id' in output[0]
assert 'task_work_dir' in output[0]
assert 'task_name' in output[0]
assert 'task_processtime' in output[0]
assert 'task_macro' in output[0]
assert 'task_logfile' in output[0]
def run_model(DesignVars):
''' Ruturns the x,y potions for the tip of the A frame '''
folder = 'C:\Users\fh\Documents\GitHub\OptimizationModel\Scripts\OptimizationStudies'
app = AnyPyProcess(
anybodycon_path=
'C:\Program Files (x86)\AnyBody Technology\AnyBody.6.0/AnyBodyCon.exe',
ignore_errors=['ERROR(OBJ.MCH.MUS6)'])
macro = [[
'load "Optimization.main.any"',
'classoperation Main.DesignVars.ta_rmin "Set Value" --value={:12f}'.
format(DesignVars[0]),
'classoperation Main.DesignVars.edl_rmin "Set Value" --value={:12f}'.
format(DesignVars[1]),
'classoperation Main.DesignVars.ehl_rmin "Set Value" --value={:12f}'.
format(DesignVars[2]),
'classoperation Main.DesignVars.ta_rmax "Set Value" --value={:12f}'.
format(DesignVars[3]),
'classoperation Main.DesignVars.edl_rmax "Set Value" --value={:12f}'.
format(DesignVars[4]),
'classoperation Main.DesignVars.ehl_rmax "Set Value" --value={:12f}'.
format(DesignVars[5]),
'classoperation Main.DesignVars.LocalStrengthFactorDorsiFlexors "Set Value" --value={:12f}'
.format(DesignVars[6]), 'operation Main.RunApplication1', 'run',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.TibialisAnterior1Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.TibialisAnterior2Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.TibialisAnterior3Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.ExtensorDigitorumLongus1Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.ExtensorDigitorumLongus2Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.ExtensorDigitorumLongus3Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.ExtensorDigitorumLongus4Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.ExtensorHallucisLongus1Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.ExtensorHallucisLongus2Par.Lt0 "Dump"',
'classoperation Main.HumanModel.BodyModel.Right.Leg.MusPar.ExtensorHallucisLongus3Par.Lt0 "Dump"',
'operation Main.RunApplication2', 'run',
'classoperation Main.DesignVars.LocalStrengthFactorDorsiFlexors "Dump"',
'classoperation Main.Studies.ParameterStudies.DorsiFlexorMuscles.IsometricStrength.Output.Strength.Val "Dump"',
'exit'
]]
output = app.start_macro(macro, folderlist=[folder])[0]
np.save('Log', DesignVars)
return (output)
def test_output_access_ragged(self, init_simple_model):
macro = [
[
'load "model.main.any" -def N_STEP="10"',
"operation Main.ArmModelStudy.InverseDynamics",
'classoperation Main.ArmModelStudy.Output.MaxMuscleActivity "Dump"',
'classoperation Main.ArmModel.GlobalRef.t "Dump"',
],
[
'load "model.main.any" -def N_STEP="20"',
"operation Main.ArmModelStudy.InverseDynamics",
'classoperation Main.ArmModelStudy.Output.MaxMuscleActivity "Dump"',
'classoperation Main.ArmModel.GlobalRef.t "Dump"',
],
]
app = AnyPyProcess()
output = app.start_macro(macro)
output["GlobalRef.t"]
output["MaxMuscleActivity"]
def test_output_save_load(self, init_simple_model):
macro = [[
'load "model.main.any" -def N_STEP="10"',
"operation Main.ArmModelStudy.InverseDynamics",
'classoperation Main.ArmModelStudy.Output.MaxMuscleActivity "Dump"',
'classoperation Main.ArmModel.GlobalRef.t "Dump"',
]]
app = AnyPyProcess()
app.start_macro(macro)
app.save_results("test.db")
reloaded = app.load_results("test.db")
reloaded["Main.ArmModel.GlobalRef.t"]
def test_output_save_load(self,init_simple_model):
macro = [['load "model.main.any" -def N_STEP="10"',
'operation Main.ArmModelStudy.InverseDynamics',
'classoperation Main.ArmModelStudy.Output.MaxMuscleActivity "Dump"',
'classoperation Main.ArmModel.GlobalRef.t "Dump"']]
app = AnyPyProcess(return_task_info=True)
app.start_macro(macro)
app.save_results('test.db')
reloaded = app.load_results('test.db')
reloaded['Main.ArmModel.GlobalRef.t']
reloaded = AnyPyProcess.load_results('test.db')
reloaded['Main.ArmModel.GlobalRef.t']
from anypytools.abcutils import AnyPyProcess
app = AnyPyProcess(num_processes = 3)
macrolist = [['load "main.any"',
'operation Main.Study.InverseDynamics',
'run',
'exit']]
app.start_macro(macrolist, search_subdirs= "[model[1-9].*main.any" )
def test_with_gui(self, init_simple_model, default_macro):
app = AnyPyProcess(silent=True, use_gui=False)
default_macro[0].append("run")
output = app.start_macro(default_macro)
assert not "ERROR" in output[0]
def test_explicit_logfiles_path(self, init_simple_model, default_macro):
logfile = pathlib.Path("test.log")
app = AnyPyProcess(silent=True, keep_logfiles=True)
output = app.start_macro(default_macro, logfile=logfile)
assert os.path.isfile(logfile)
def test_explicit_logfiles_path(self, init_simple_model, default_macro):
logfile = pathlib.Path("test.log")
app = AnyPyProcess(silent=True, keep_logfiles=True, return_task_info=True)
output = app.start_macro(default_macro, logfile=logfile)
assert os.path.isfile(logfile)
from anypytools.abcutils import AnyPyProcess
nSteplist = [10,20,40,50,60,70,80,90,100,110,120]
app = AnyPyProcess(num_processes = 2)
macrolist = []
for nStep in nSteplist:
macrolist.append( ['load "Demo.Arm2D.any" -def N_STEP="{0}"'.format(nStep),
'operation Main.Study.InverseDynamics', 'run'] )
app.start_macro(macrolist)
def test_logfile_persistance(self, init_simple_model, default_macro) :
app = AnyPyProcess(silent=True, keep_logfiles=True,
return_task_info=True)
output = app.start_macro(default_macro)
assert os.path.isfile(output[0]['task_logfile'])
