def onInit(self):
if 'sessionname' not in self.params.keys():
self.params['sessionname'] = leginondata.SessionData(
).direct_query(self.params['expid'])['name']
self.dd = apDDprocess.initializeDDFrameprocess(
self.params['sessionname'], self.params['wait'])
self.dd.setRunDir(self.params['rundir'])
# The gain/dark corrected ddstack is unlikely to be on local disk
if 'tempdir' not in self.params.keys():
self.dd.setTempDir()
else:
self.dd.setTempDir(self.params['tempdir'])
self.dd.setNewBinning(self.rundata['params']['bin'])
# Get the unfinished ddstack run parameters to apply them here
jobdata = apDatabase.getJobDataFromPathAndType(
self.rundata['path']['path'], 'makeddrawframestack')
self.ddstack_script_params = apScriptLog.getScriptParamValuesFromRunname(
self.rundata['runname'], self.rundata['path'], jobdata)
if 'no-keepstack' in self.ddstack_script_params.keys():
self.dd.setKeepStack(False)
self.dd.setDoseFDriftCorrOptions(self.ddstack_script_params)
# Give an unique lockname
self.setLockname('ddalign')
self.success_count = 0
def getRunData(self): ### setup refinement run jobdata = apDatabase.getJobDataFromPathAndType(self.params['rundir'], "runfrealign") runq = appiondata.ApRefineRunData() runq['runname'] = self.params['runname'] runq['package'] = "Frealign" runq['description'] = self.params['description'] runq['hidden'] = False runq['num_iter'] = self.numiter runq['stack'] = apStack.getOnlyStackData(self.params['stackid']) runq['initialModel'] = apModel.getModelFromId(self.params['modelid']) runq['path'] = appiondata.ApPathData(path=os.path.abspath(self.params['rundir'])) runq['job'] = jobdata return runq
def getRunData(self): ### setup refinement run jobdata = apDatabase.getJobDataFromPathAndType(self.params['rundir'], "runfrealign") runq = appiondata.ApRefineRunData() runq['runname'] = self.params['runname'] runq['package'] = "Frealign" runq['description'] = self.params['description'] runq['hidden'] = False runq['num_iter'] = self.numiter runq['stack'] = apStack.getOnlyStackData(self.params['stackid']) runq['initialModel'] = apModel.getModelFromId(self.params['modelid']) runq['path'] = appiondata.ApPathData(path=os.path.abspath(self.params['rundir'])) runq['job'] = jobdata return runq
def getRunData(self):
### setup refinement run
jobdata = apDatabase.getJobDataFromPathAndType(self.params["rundir"], "runfrealign")
runq = appiondata.ApRefineRunData()
runq["runname"] = self.params["runname"]
runq["package"] = "Frealign"
runq["description"] = self.params["description"]
runq["hidden"] = False
runq["num_iter"] = self.numiter
runq["stack"] = apStack.getOnlyStackData(self.params["stackid"])
runq["initialModel"] = apModel.getModelFromId(self.params["modelid"])
runq["path"] = appiondata.ApPathData(path=os.path.abspath(self.params["rundir"]))
runq["job"] = jobdata
return runq
def onInit(self):
if 'sessionname' not in self.params.keys():
self.params['sessionname'] = leginondata.SessionData().direct_query(self.params['expid'])['name']
self.dd = apDDprocess.initializeDDFrameprocess(self.params['sessionname'],self.params['wait'])
self.dd.setRunDir(self.params['rundir'])
# The gain/dark corrected ddstack is unlikely to be on local disk
if 'tempdir' not in self.params.keys():
self.dd.setTempDir()
else:
self.dd.setTempDir(self.params['tempdir'])
self.dd.setNewBinning(self.rundata['params']['bin'])
# Get the unfinished ddstack run parameters to apply them here
jobdata = apDatabase.getJobDataFromPathAndType(self.rundata['path']['path'], 'makeddrawframestack')
self.ddstack_script_params = apScriptLog.getScriptParamValuesFromRunname(self.rundata['runname'],self.rundata['path'],jobdata)
if 'no-keepstack' in self.ddstack_script_params.keys():
self.dd.setKeepStack(False)
# Give an unique lockname
self.setLockname('ddalign')
self.success_count = 0