def __init__(self,
name,
extension_name,
extension_wave=None,
extension_ivar=None,
extension_mask=None,
db_table='spaxel',
unit=u.dimensionless_unscaled,
scale=1,
formats={},
pixmask_flag='MANGA_DRP3PIXMASK',
description=''):
self.name = name
self._extension_name = extension_name
self._extension_wave = extension_wave
self._extension_ivar = extension_ivar
self._extension_mask = extension_mask
self.pixmask_flag = pixmask_flag
self.db_table = db_table
self._parent = None
self.formats = formats
self.description = description
self.unit = u.CompositeUnit(scale, unit.bases, unit.powers)
def __new__(cls,
array,
unit=None,
scale=1,
ivar=None,
mask=None,
binid=None,
pixmask_flag=None,
dtype=None,
copy=True):
if scale is not None:
unit = units.CompositeUnit(unit.scale * scale, unit.bases,
unit.powers)
obj = units.Quantity(np.array(array),
unit=unit,
dtype=dtype,
copy=copy)
obj = obj.view(cls)
obj._set_unit(unit)
obj._maps = None
obj._datamodel = None
obj.ivar = np.array(ivar) if ivar is not None else None
obj.mask = np.array(mask) if mask is not None else None
obj.binid = np.array(binid) if binid is not None else None
obj.pixmask_flag = pixmask_flag
return obj
def __init__(self,
name,
extension_name,
extension_wave=None,
extension_std=None,
extension_mask=None,
db_table='cube',
unit=u.dimensionless_unscaled,
scale=1,
formats={},
pixmask_flag=None,
description=''):
self.name = name
self._extension_name = extension_name
self._extension_wave = extension_wave
self._extension_std = extension_std
self._extension_mask = extension_mask
self.pixmask_flag = pixmask_flag
self.db_table = db_table
self.formats = formats
self.description = description
self._parent = None
self.unit = u.CompositeUnit(scale, unit.bases, unit.powers)
def descale(self):
"""Returns a copy of the object in which the scale is unity.
Example:
>>> dc.unit
Unit("1e-17 erg / (Angstrom cm2 s spaxel)")
>> dc[100, 15, 15]
<DataCube 0.270078063011169 1e-17 erg / (Angstrom cm2 s spaxel)>
>>> dc_descaled = dc.descale()
>>> d_descaled.unit
Unit("Angstrom cm2 s spaxel")
>>> dc[100, 15, 15]
<DataCube 2.70078063011169e-18 erg / (Angstrom cm2 s spaxel)>
"""
if self.unit.scale == 1:
return self
value_descaled = self.value * self.unit.scale
value_unit = units.CompositeUnit(1, self.unit.bases, self.unit.powers)
if self.ivar is not None:
ivar_descaled = self.ivar / (self.unit.scale**2)
else:
ivar_descaled = None
return self.__class__(value_descaled,
self.wavelength,
unit=value_unit,
ivar=ivar_descaled,
mask=self.mask)
def __init__(self, name, extension_name, extension_wave=None,
extension_ivar=None, extension_mask=None, channels=[],
unit=u.dimensionless_unscaled, scale=1, formats={},
parent=None, binid=None, description='', db_table='modelspaxel'):
self.name = name
self._extension_name = extension_name
self._extension_wave = extension_wave
self._extension_ivar = extension_ivar
self._extension_mask = extension_mask
self.channels = channels
self.unit = u.CompositeUnit(scale, unit.bases, unit.powers)
self.formats = formats
self.description = description
self.db_table = db_table
self._binid = binid
self._parent = None
self.parent = parent
self._binid = copy_mod.deepcopy(binid)
if self._binid is not None:
self._binid.parent = self.parent
def __init__(self, name, channel=None, ivar=False, mask=False, unit=None,
scale=1, formats={}, parent=None, binid=None, description=''):
self.name = name
self.channel = copy_mod.deepcopy(channel)
self.ivar = ivar
self.mask = mask
self.formats = formats
if unit is not None:
self.unit = u.CompositeUnit(scale, unit.bases, unit.powers)
elif unit is None and self.channel is None:
self.unit = u.dimensionless_unscaled
else:
self.unit = self.channel.unit
self._binid = binid
# Makes sure the channel shares the units and scale
if self.channel:
self.channel.unit = self.unit
self.description = description
self._parent = None
self.parent = parent
self._binid = copy_mod.deepcopy(binid)
if self._binid is not None:
self._binid.parent = self.parent
def test_initialisation():
assert u.Unit(u.m) is u.m
ten_meter = u.Unit(10. * u.m)
assert ten_meter == u.CompositeUnit(10., [u.m], [1])
assert u.Unit(ten_meter) is ten_meter
assert u.Unit(10. * ten_meter) == u.CompositeUnit(100., [u.m], [1])
foo = u.Unit('foo', (10. * ten_meter)**2, namespace=locals())
assert foo == u.CompositeUnit(10000., [u.m], [2])
assert u.Unit('m') == u.m
assert u.Unit('') == u.dimensionless_unscaled
assert u.one == u.dimensionless_unscaled
assert u.Unit('10 m') == ten_meter
assert u.Unit(10.) == u.CompositeUnit(10., [], [])
def __init__(self, name, unit=u.dimensionless_unscaled, scale=1, formats={},
idx=None, db_name=None, description=''):
self.name = name
self.unit = u.CompositeUnit(scale, unit.bases, unit.powers)
self.formats = formats
self.idx = idx
self.db_name = db_name or self.name
self.description = description
def __new__(cls, value, wavelength, scale=None, unit=units.dimensionless_unscaled,
wavelength_unit=units.Angstrom, redcorr=None, ivar=None, mask=None,
binid=None, pixmask_flag=None, dtype=None, copy=True, **kwargs):
# If the scale is defined, creates a new composite unit with the input scale.
if scale is not None:
unit = units.CompositeUnit(unit.scale * scale, unit.bases, unit.powers)
assert wavelength is not None, 'a valid wavelength array is required'
assert isinstance(value, np.ndarray) and value.ndim == 3, 'value must be a 3D array.'
assert isinstance(wavelength, np.ndarray) and wavelength.ndim == 1, \
'wavelength must be a 1D array.'
assert len(wavelength) == value.shape[0], \
'wavelength and value spectral dimensions do not match'
if ivar is not None:
assert isinstance(ivar, np.ndarray) and ivar.shape == value.shape, 'invalid ivar shape'
if mask is not None:
assert isinstance(mask, np.ndarray) and mask.shape == value.shape, 'invalid mask shape'
if binid is not None:
assert (isinstance(binid, np.ndarray) and
binid.shape == value.shape[1:]), 'invalid binid shape'
obj = units.Quantity(value, unit=unit, **kwargs)
obj = obj.view(cls)
obj._set_unit(unit)
assert wavelength is not None, 'invalid wavelength'
if isinstance(wavelength, units.Quantity):
obj.wavelength = wavelength
else:
obj.wavelength = np.array(wavelength) * wavelength_unit
obj.ivar = np.array(ivar) if ivar is not None else None
obj.mask = np.array(mask) if mask is not None else None
obj.binid = np.array(binid) if binid is not None else None
obj.pixmask_flag = pixmask_flag
if redcorr is not None:
assert len(redcorr) == len(obj.wavelength), 'invalid length for redcorr.'
obj.redcorr = np.array(redcorr)
return obj
def standardise_unit(unit):
"""Standardise unit.
Changes applied by this function:
* Drop "photon" == "ph" from the unit
* Drop "count" == "ct" from the unit
Parameters
----------
unit : `~astropy.units.Unit` or str
Any old unit
Returns
-------
unit : `~astropy.units.Unit`
Shiny new, standardised unit
Examples
--------
>>> from gammapy.utils.units import standardise_unit
>>> standardise_unit('ph cm-2 s-1')
Unit("1 / (cm2 s)")
>>> standardise_unit('ct cm-2 s-1')
Unit("1 / (cm2 s)")
>>> standardise_unit('cm-2 s-1')
Unit("1 / (cm2 s)")
"""
unit = u.Unit(unit)
bases, powers = [], []
for base, power in zip(unit.bases, unit.powers):
if str(base) not in {"ph", "ct"}:
bases.append(base)
powers.append(power)
return u.CompositeUnit(scale=unit.scale, bases=bases, powers=powers)
def test_composite_unit_get_format_name():
"""See #1576"""
unit1 = u.Unit('nrad/s')
unit2 = u.Unit('Hz(1/2)')
assert (str(u.CompositeUnit(1, [unit1, unit2],
[1, -1])) == 'nrad / (Hz(1/2) s)')