def test_list_set_name(self):
lst = List(name="my-list")
lst.add_item("First item")
lst.add_item("Second item")
self.assertEqual(
lst.html(), "<ul id='my-list'>"
"<li>First item</li>"
"<li>Second item</li>"
"</ul>")
def test_nested_lists(self):
inner_lst = List()
inner_lst.add_item("First item")
inner_lst.add_item("Second item")
self.assertEqual(
inner_lst.html(), "<ul>"
"<li>First item</li>"
"<li>Second item</li>"
"</ul>")
outer_lst = List()
outer_lst.add_item(inner_lst)
self.assertEqual(
outer_lst.html(), "<ul>"
"<li><ul>"
"<li>First item</li>"
"<li>Second item</li>"
"</ul></li>"
"</ul>")
def test_ordered_list(self):
lst = List(ordered=True)
lst.add_item("First item")
self.assertEqual(lst.html(), "<ol>" "<li>First item</li>" "</ol>")
lst.add_item("Second item")
self.assertEqual(
lst.html(), "<ol>"
"<li>First item</li>"
"<li>Second item</li>"
"</ol>")
def test_unordered_list(self):
lst = List()
lst.add_item("First item")
self.assertEqual(lst.html(), "<ul>" "<li>First item</li>" "</ul>")
lst.add_item("Second item")
self.assertEqual(
lst.html(), "<ul>"
"<li>First item</li>"
"<li>Second item</li>"
"</ul>")
def test_empty_list(self):
lst = List()
self.assertEqual(lst.html(), "")
print "Median read count : %d" % data.median_read_count
print "Mean read count : %d" % data.mean_read_count
print "Std read count : %d" % data.std_read_count
print "Total #barcodes : %d" % data.total_barcodes
print "Assigned #barcodes : %d" % data.assigned_barcodes
# Make a HTML report
report = Document(title="ICell8 processing summary")
report.add_css_rule(css_rules.QC_REPORT_CSS_RULES)
report.add_css_rule("body { border: solid 1px grey;\n"
" font-size: 80%;\n"
" font-family: sans-serif; }")
# Table of contents
toc = report.add_section("Contents", name="toc")
toc_list = List()
toc.add(toc_list)
# Files
files_info = report.add_section("Stats files")
stats_files = "Statistics: %s" % Link(
"[TSV]", os.path.relpath(stats_file, os.path.dirname(out_file)))
if xlsx_file is not None:
stats_files += " | %s" % Link(
"[XLSX]", os.path.relpath(xlsx_file, os.path.dirname(out_file)))
files_info.add(stats_files)
toc_list.add_item(Link(files_info.title, files_info))
# General info
general_info = report.add_section("General info", name="general_info")
tbl = Table(columns=('name', 'value'))