def configure(ctx):
atl.conf_lib(ctx,
tool, ["fftw3"],
"fftw_execute",
"fftw3.h",
defines="HAS_FFTW3",
install=installfftw3)
def configure(ctx):
atl.conf_lib(
ctx,
tool, ["gsl", "gslcblas"],
["gsl_ran_gaussian", "gsl_blas_dgemm", "gsl_linalg_cholesky_invert"],
["gsl/gsl_randist.h", "gsl/gsl_blas.h", "gsl/gsl_linalg.h"],
install=installgsl)
def configure(ctx):
atl.conf_lib(ctx,
"cfitsio", ["cfitsio"],
"fits_init_cfitsio",
"fitsio.h",
msg="",
opt_name="cfitsio",
uselib=["cshlib"],
install=install_cfitsio)
def configure(ctx):
ctx.env.has_pmc = False
#pmc_config_path = ctx.find_program("pmc-config",path_list=[ctx.options.pmc_prefix+"/bin"])[0]
try:
pmc_config_path = ctx.find_program("pmc-config",path_list=[ctx.options.pmc_prefix+"/bin"])
pmcflagline = ctx.cmd_and_log(pmc_config_path)
except Exception as e:
pmcflagline=''
atl.conf_lib(ctx,"pmc","pmc","init_distribution","pmc.h",["pmclib","pmctools"],defines=["HAS_PMC"],flagline=pmcflagline)
def configure(ctx):
atl.conf_lib(ctx, tool, ["hdf5", "hdf5_hl"], "H5Fcreate",
"hdf5.h", defines="HAS_HDF5", install=installhdf5)
try:
kw = {}
kw["fragment"] = '''#include "hdf5.h"
#include <stdio.h>
int main() {
herr_t res;
unsigned int majnum,minnum,relnum;
res = H5get_libversion(&majnum, &minnum, &relnum );
if (res<0) return -1;
printf("%d.%d.%d\\n",majnum,minnum,relnum);
printf("%d\\n",H5Gopen == H5Gopen2);
return 0;}'''
kw["use"] = "hdf5"
kw["execute"] = True
kw['compiler'] = 'c'
kw['define_ret'] = "HDF5_VERSION"
ctx.validate_c(kw)
ctx.start_msg('Checking for hdf5 version (>1.8)')
ret = None
try:
ret = ctx.run_c_code(**kw)
except ctx.errors.ConfigurationError as e:
ctx.end_msg(kw['errmsg'], 'YELLOW')
from waflib import Logs
if Logs.verbose > 1:
raise
else:
ctx.fatal('The configuration failed')
else:
rets = ret.split("\n")
ret1 = rets[0]
ret2 = rets[1]
if int(ret1.split(".")[1]) != 8 or int(ret2) != 1:
if int(ret1.split(".")[1]) != 8:
ret = ret1
else:
ret = "using HDF 1.6 API"
ctx.end_msg(ret, "YELLOW")
raise Exception("Atrgl")
else:
ctx.end_msg(ret1)
except Exception as e:
print(e)
atl.conf_lib(ctx, tool, ["hdf5", "hdf5_hl"], "H5Fcreate", "hdf5.h",
defines="HAS_HDF5", install=installhdf5, forceinstall=True)
def configure(ctx):
# atl.conf_lib(ctx,"cfitsio",["cfitsio"],"fits_init_cfitsio","fitsio.h",msg="",opt_name="healpix",uselib=["cshlib"],install=install_cfitsio)
ctx.env.th = False
atl.conf_lib(
ctx,
"chealpix", ["chealpix", "m", "cfitsio"],
"pix2vec_ring",
"chealpix.h",
msg="or check that the path also point toward your cfitsio install",
opt_name="healpix",
uselib=["cpic", "cfistio"],
install=install_healpix)
atl.conf_lib(
ctx,
"healpix_f90", ["healpix", "cfitsio"],
"HEALPIX_TYPES",
msg="or check that the path also point toward your cfitsio install",
opt_name="healpix",
add_lib_code="f90",
uselib=["fpic", "cfistio"],
install=install_healpix)
def configure(ctx):
#always assume that I need a dedicated include file.
if ctx.options.lapack_apple:
ctx.start_msg("Check apple lapack")
if sys.platform.lower()!="darwin":
ctx.end_msg("not on darwin ! Got '%s'"%sys.platform,color="YELLOW")
raise Errors.WafError("cannot find apple lapack")
ctx.end_msg("ok")
lapack_extradefs = ["HAS_LAPACK"]
lapack_libs = ["BLAS","LAPACK"]
lapack_includes = ["lapack_clik.h"]
lapack_extradefs += ["LAPACK_CLIK"]
ctx.options.lapack_include = osp.join(ctx.env.PREFIX,"include")
ctx.options.lapack_lib = "/System/Library/Frameworks/Accelerate.framework/Versions/Current/Frameworks/vecLib.framework/Versions/Current"
do_include(ctx,"%s_")
elif ctx.options.lapack_mkl:
# parse version
ctx.start_msg("Check mkl version")
if ctx.options.lapack_mkl_version.strip()[:4] not in ("10.0","10.1","10.2","10.3"):
ctx.end_msg(ctx.options.lapack_mkl_version.strip(),color="YELLOW")
raise Errors.WafError("Cannot understand mkl version '%s'"%ctx.options.lapack_mkl_version.strip())
version = int(ctx.options.lapack_mkl_version.strip()[:4].split(".")[1])
ctx.end_msg("10.%d"%version)
lapack_extradefs = ["HAS_LAPACK"]
lapack_extradefs += ["HAS_MKL"]
lapack_includes = ["mkl_lapack.h","mkl_blas.h"]
lapack_libs = []
tag = sys.platform.lower()
if tag=="darwin":
pass
elif "linux" in tag:
tag="linux"
else:
raise Errors.WafError("unknown platform '%s'"%tag)
tag+="_10.%d"%version
mopt = ctx.env.mopt
if "64" in mopt:
tag+="_64"
else:
tag +="_32"
if sys.platform.lower()!='darwin':
#I need to create my own lapack !
cmdline = """gcc -shared -Bdynamic %(func_list)s -Wl,--start-group %(ars)s -Wl,--end-group %(Lomp)s %(omp)s -o "%(res)s" """
cmdlist = {}
cmdlist["func_list"] = " ".join(["-u %s_"%v for v in lapack_funcs.split()])
cmdlist["ars"] = " ".join([osp.join(mkl_options[tag][0]%(ctx.options.lapack_mkl),"lib%s.a"%v.strip()) for v in mkl_options[tag][1].split("-l") if v.strip() and v.strip()[:3]=="mkl"])
cmdlist["Lomp"] = " ".join("-L%s"%v.strip() for v in ctx.env.LIBPATH_fc_runtime if v.strip())
cmdlist["omp"] = " ".join([v.strip() for v in mkl_options[tag][1].split() if v.strip() and "mkl" not in v])
cmdlist["res"] = osp.join(ctx.env.LIBDIR,ctx.env.cshlib_PATTERN%"clik_mkl")
cmdline = cmdline%cmdlist
#print cmdline
ctx.start_msg("create specific mkl lib")
llgo,llge = ctx.cmd_and_log(cmdline, output=waflib.Context.BOTH)
#print llgo
#print llge
ctx.end_msg(cmdlist["res"])
ctx.options.lapack_link = "-lclik_mkl "+cmdlist["omp"]
ctx.options.lapack_lib = ctx.env.LIBDIR+":".join([""]+ctx.env.LIBPATH_fc_runtime)
ctx.options.lapack_include = ctx.options.lapack_mkl+"/include"
else:
ctx.options.lapack_link = mkl_options[tag][1]
ctx.options.lapack_lib = mkl_options[tag][0]%(ctx.options.lapack_mkl)+":".join([""]+ctx.env.LIBPATH_fc_runtime)
if "framework" in ctx.options.lapack_mkl.lower():
ctx.options.lapack_include = ctx.options.lapack_mkl+"/Headers"
else:
ctx.options.lapack_include = ctx.options.lapack_mkl+"/include"
#try:
# atl.conf_lib(ctx,"lapack",lapack_libs,lapack_funcs.split(),lapack_includes,defines=lapack_extradefs,install=installlapack)
#except Exception,e:
# pass
#lapack_extradefs = ["HAS_LAPACK"]
#lapack_libs = ["BLAS","LAPACK"]
#lapack_includes = ["lapack.h","blas.h"]
#if "mkl" in ctx.options.lapack_lib.lower() or "mkl" in ctx.options.lapack_include.lower() or "mkl" in ctx.options.lapack_link or ctx.options.lapack_mkl:
# ctx.env.mkl = True
# lapack_extradefs += ["HAS_MKL"]
# lapack_includes = ["mkl_lapack.h","mkl_blas.h"]
# if ctx.options.lapack_mkl:
# if ctx.env.has_ifort==False:
# raise Exception("cannot use MKL without ifort")
# if "framework" in ctx.options.lapack_mkl.lower():
# # guess we are on macosx
# # get the path of the framework
# if ctx.options.lapack_mkl[-1] == "/":
# fpath,fname = osp.split(ctx.options.lapack_mkl[:-1])
# else:
# fpath,fname = osp.split(ctx.options.lapack_mkl)
# fname = fname.split(".")[0]
# ctx.options.lapack_include = ctx.options.lapack_mkl+"/Headers"
# ctx.options.lapack_lib = ctx.options.lapack_mkl+"/Libraries/universal"
# if ctx.options.lapack_link=="":
# ctx.options.lapack_link = "-lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core"
# else:
# # assume it's 10 on linux
# # check whether it's 10.3
# if ctx.options.m32:
# libsuffix="/lib/32"
# libdep = "-lmkl_intel"
# else:
# libsuffix="/lib/em64t"
# libdep = "-lmkl_intel_lp64"
# if ctx.options.lapack_link=="":
# ctx.options.lapack_link = "-lmkl_lapack -lmkl_intel_thread -lmkl_core -liomp5 -lm -lpthread -lmkl_def" + libdep
# if not ctx.options.m32 and osp.exists(ctx.options.lapack_mkl+"/lib/intel64"):
# libsuffix="/lib/intel64"
# ctx.options.lapack_link = "-lmkl_intel_thread -lmkl_core -liomp5 -lm -lpthread -lmkl_def" + libdep
# ctx.options.lapack_include=ctx.options.lapack_mkl+"/include"
# ctx.options.lapack_lib=ctx.options.lapack_mkl+libsuffix+":".join([""]+ctx.env.LIBPATH_fc_runtime)
elif atl.upgrade(ctx,"lapack") or ctx.options.lapack_islocal or ctx.options.lapack_forceinstall or atl.shouldIinstall_all(ctx,"lapack"):
ctx.env.append_value("LIBPATH_lapack",ctx.env.LIBPATH_fc_runtime)
ctx.env.append_value("RPATH_lapack",ctx.env.RPATH_fc_runtime)
ctx.env.append_value("LIB_lapack",ctx.env.LIB_fc_runtime)
lapack_libs = ["lapack_clik","blas_clik"]
lapack_includes = ["lapack_clik.h"]
lapack_extradefs = ["HAS_LAPACK"]
lapack_extradefs += ["LAPACK_CLIK"]
else:
lapack_libs = []
lapack_includes = ["lapack_clik.h"]
lapack_extradefs = ["HAS_LAPACK"]
lapack_extradefs += ["LAPACK_CLIK"]
do_include(ctx)
atl.conf_lib(ctx,"lapack",lapack_libs,lapack_funcs.split(),lapack_includes,defines=lapack_extradefs,install=installlapack)
#try to support many flavours of lapack
import autoinstall_lib as atl
from waflib import Logs
import os.path as osp
def options(ctx):
atl.add_lib_option("pmc",ctx,install=False)
def configure(ctx):
ctx.env.has_pmc = False
#pmc_config_path = ctx.find_program("pmc-config",path_list=[ctx.options.pmc_prefix+"/bin"])[0]
try:
pmc_config_path = ctx.find_program("pmc-config",path_list=[ctx.options.pmc_prefix+"/bin"])
pmcflagline = ctx.cmd_and_log(pmc_config_path)
except Exception,e:
pmcflagline=''
atl.conf_lib(ctx,"pmc","pmc","init_distribution","pmc.h",["pmclib","pmctools"],defines=["HAS_PMC"],flagline=pmcflagline)
def configure(ctx): atl.conf_lib(ctx,"cfitsio",["cfitsio"],"fits_init_cfitsio","fitsio.h",msg="",opt_name="cfitsio",uselib=["cshlib"],install=install_cfitsio) ctx.env.th = False
