def atest(self):
with self.temp_filename('.nc') as tfile:
subprocess.check_call(['ncgen', '-o', tfile, cdlfile])
validation = bald.validate_netcdf(tfile, cache=self.acache)
exns = validation.exceptions()
self.assertTrue(validation.is_valid(),
msg='{} != []'.format(exns))
def test_process_chain(self):
with self.temp_filename('.nc') as tfile:
cdl_file = os.path.join(self.cdl_path, 'ProcessChain0300.cdl')
subprocess.check_call(['ncgen', '-o', tfile, cdl_file])
validation = bald.validate_netcdf(tfile)
exns = validation.exceptions()
self.assertTrue(validation.is_valid(), msg='{} != []'.format(exns))
def test_mismatch_zeroth(self):
with self.temp_filename('.nc') as tfile:
f = netCDF4.Dataset(tfile, "w", format="NETCDF4")
f = _fattrs(f)
f = _create_parent_child(f, (11, 17), (11, 13))
f.close()
validation = bald.validate_netcdf(tfile)
self.assertFalse(validation.is_valid())
def test_valid_uri(self):
with self.temp_filename('.nc') as tfile:
f = netCDF4.Dataset(tfile, "w", format="NETCDF4")
f = _fattrs(f)
f.close()
validation = bald.validate_netcdf(tfile)
self.assertTrue(validation.is_valid())
def test_validate_multi_array_reference(self):
cdlfile = os.path.join(self.cdl_path, 'multi_array_reference.cdl')
with self.temp_filename('.nc') as tfile:
subprocess.check_call(['ncgen', '-o', tfile, cdlfile])
validation = bald.validate_netcdf(tfile, cache=self.acache)
exns = validation.exceptions()
self.assertTrue(validation.is_valid(), msg='{} != []'.format(exns))
def test_match(self):
with self.temp_filename('.nc') as tfile:
f = netCDF4.Dataset(tfile, "w", format="NETCDF4")
f = _fattrs(f)
f = _create_parent_child(f, (11, 17), (11, 17))
f.close()
validation = bald.validate_netcdf(tfile)
exns = validation.exceptions()
self.assertTrue(validation.is_valid(), msg='{} != []'.format(exns))
def test_invalid_uri(self):
with self.temp_filename('.nc') as tfile:
f = netCDF4.Dataset(tfile, "w", format="NETCDF4")
f = _fattrs(f)
setattr(f, 'bald__turtle', 'bald__walnut')
f.close()
validation = bald.validate_netcdf(tfile)
self.assertFalse(validation.is_valid())
def test_valid_uri(self):
with self.temp_filename('.nc') as tfile:
f = netCDF4.Dataset(tfile, "w", format="NETCDF4_CLASSIC")
f = _fattrs(f)
f.close()
validation = bald.validate_netcdf(tfile, cache=self.acache)
exns = validation.exceptions()
self.assertTrue(validation.is_valid(), msg='{} != []'.format(exns))
def test_match(self):
with self.temp_filename('.nc') as tfile:
f = netCDF4.Dataset(tfile, "w", format="NETCDF4")
f = _fattrs(f)
f = _create_parent_child(f, (11, 17), (11, 17))
f.close()
validation = bald.validate_netcdf(tfile, cache=self.acache)
exns = validation.exceptions()
self.assertTrue(validation.is_valid(), msg='{} != []'.format(exns))
def test_valid_uri(self):
with self.temp_filename('.nc') as tfile:
f = netCDF4.Dataset(tfile, "w", format="NETCDF4")
f = _fattrs(f)
f.close()
validation = bald.validate_netcdf(tfile, cache=self.acache)
exns = validation.exceptions()
self.assertTrue(validation.is_valid(), msg='{} != []'.format(exns))
def test_mismatch_zeroth(self):
with self.temp_filename('.nc') as tfile:
f = netCDF4.Dataset(tfile, "w", format="NETCDF4")
f = _fattrs(f)
f = _create_parent_child(f, (11, 17), (11, 13))
f.close()
validation = bald.validate_netcdf(tfile)
exns = validation.exceptions()
expected = ['p declares a child of c but the arrays do not conform to the bald array reference rules']
self.assertTrue((not validation.is_valid()) and exns == expected,
msg='{} != {}'.format(exns, expected))
def test_invalid_uri(self):
with self.temp_filename('.nc') as tfile:
f = netCDF4.Dataset(tfile, "w", format="NETCDF4")
f = _fattrs(f)
setattr(f, 'bald__turtle', 'bald__walnut')
f.close()
validation = bald.validate_netcdf(tfile)
exns = validation.exceptions()
expected = ['http://binary-array-ld.net/latest/turtle is not resolving as a resource (404).',
'http://binary-array-ld.net/latest/walnut is not resolving as a resource (404).']
self.assertTrue((not validation.is_valid()) and exns == expected,
msg='{} != {}'.format(exns, expected))
def test_invalid_uri(self):
with self.temp_filename('.nc') as tfile:
f = netCDF4.Dataset(tfile, "w", format="NETCDF4")
f = _fattrs(f)
setattr(f, 'bald__turtle', 'bald__walnut')
f.close()
validation = bald.validate_netcdf(tfile, cache=self.acache)
exns = validation.exceptions()
expected = ['http://binary-array-ld.net/latest/turtle is not resolving as a resource (404).',
'http://binary-array-ld.net/latest/walnut is not resolving as a resource (404).']
self.assertTrue((not validation.is_valid()) and exns == expected,
msg='{} != {}'.format(exns, expected))
def test_grid_OISST_GHRSST(self):
"""Override grid OISST GHRSST test with currently accepted failures"""
with self.temp_filename('.nc') as tfile:
cdl_file = os.path.join(self.cdl_path, 'grid_OISST_GHRSST.cdl')
subprocess.check_call(['ncgen', '-o', tfile, cdl_file])
validation = bald.validate_netcdf(tfile, cache=self.acache)
exns = validation.exceptions()
exns.sort()
expected = ['http://www.ncdc.noaa.gov/sst is not resolving as a resource (404).',
'http://www.ncdc.noaa.gov/sst/ is not resolving as a resource (404).']
expected.sort()
self.assertTrue(not validation.is_valid() and exns == expected,
msg='{} \n!= \n{}'.format(exns, expected))
def test_grid_OISST_GHRSST(self):
"""Override grid OISST GHRSST test with currently accepted failures"""
with self.temp_filename('.nc') as tfile:
cdl_file = os.path.join(self.cdl_path, 'grid_OISST_GHRSST.cdl')
subprocess.check_call(['ncgen', '-o', tfile, cdl_file])
validation = bald.validate_netcdf(tfile)
exns = validation.exceptions()
exns.sort()
expected = ['http://www.ncdc.noaa.gov/sst is not resolving as a resource (404).',
'http://www.ncdc.noaa.gov/sst/ is not resolving as a resource (404).']
expected.sort()
self.assertTrue(not validation.is_valid() and exns == expected,
msg='{} \n!= \n{}'.format(exns, expected))
def test_mismatch_zeroth(self):
with self.temp_filename('.nc') as tfile:
f = netCDF4.Dataset(tfile, "w", format="NETCDF4")
f = _fattrs(f)
f = _create_parent_child(f, (11, 17), (11, 13))
f.close()
validation = bald.validate_netcdf(tfile, cache=self.acache)
exns = validation.exceptions()
expected = [('file://{t}/source_variable declares a target of '
'file://{t}/target_variable but the arrays do not '
'conform to the bald array reference rules'
'').format(t=tfile)]
self.assertTrue((not validation.is_valid()) and exns == expected,
msg='{} != {}'.format(exns, expected))
def test_mismatch_zeroth(self):
with self.temp_filename('.nc') as tfile:
f = netCDF4.Dataset(tfile, "w", format="NETCDF4")
f = _fattrs(f)
f = _create_parent_child(f, (11, 17), (11, 13))
f.close()
validation = bald.validate_netcdf(tfile, cache=self.acache)
exns = validation.exceptions()
expected = [('file://{t}/parent_variable declares a child of '
'file://{t}/child_variable but the arrays do not '
'conform to the bald array reference rules'
'').format(t=tfile)]
self.assertTrue((not validation.is_valid()) and exns == expected,
msg='{} != {}'.format(exns, expected))
def test_ereefs_gbr4_ncld(self):
"""Override ereefs test with currently accepted failures"""
with self.temp_filename('.nc') as tfile:
cdl_file = os.path.join(self.cdl_path, 'ereefs_gbr4_ncld.cdl')
subprocess.check_call(['ncgen', '-o', tfile, cdl_file])
validation = bald.validate_netcdf(tfile, cache=self.acache)
exns = validation.exceptions()
exns.sort()
expected = ['http://qudt.org/vocab/unit#Meter is not resolving as a resource (404).',
'http://qudt.org/vocab/unit#MeterPerSecond is not resolving as a resource (404).',
'http://qudt.org/vocab/unit#MeterPerSecond is not resolving as a resource (404).',
'http://qudt.org/vocab/unit#DegreeCelsius is not resolving as a resource (404).']
expected.sort()
self.assertTrue(not validation.is_valid() and exns == expected,
msg='{} \n!= \n{}'.format(exns, expected))
def test_ereefs_gbr4_ncld(self):
"""Override ereefs test with currently accepted failures"""
with self.temp_filename('.nc') as tfile:
cdl_file = os.path.join(self.cdl_path, 'ereefs_gbr4_ncld.cdl')
subprocess.check_call(['ncgen', '-o', tfile, cdl_file])
validation = bald.validate_netcdf(tfile)
exns = validation.exceptions()
exns.sort()
expected = ['http://qudt.org/vocab/unit#Meter is not resolving as a resource (404).',
'http://qudt.org/vocab/unit#MeterPerSecond is not resolving as a resource (404).',
'http://qudt.org/vocab/unit#MeterPerSecond is not resolving as a resource (404).',
'http://qudt.org/vocab/unit#DegreeCelsius is not resolving as a resource (404).']
expected.sort()
self.assertTrue(not validation.is_valid() and exns == expected,
msg='{} \n!= \n{}'.format(exns, expected))
def atest(self):
with self.temp_filename('.nc') as tfile:
subprocess.check_call(['ncgen', '-o', tfile, cdlfile])
validation = bald.validate_netcdf(tfile, cache=self.acache)
exns = validation.exceptions()
self.assertTrue(validation.is_valid(), msg='{} != []'.format(exns))
