Beispiel #1
0
 def deserialize(file_path):
     """
     This method re-rendered that serialized, compressed data found in the gzipped file located via the given
     file path, into a fully restored object of the ClusterPacket class.
     :param file_path: The locatation of the gzipped file containing the serialized object.
     """
     cluster_lines = []
     clusters = []
     cluster_packet_id = 0
     sample = None
     with gzip.open(file_path, 'rb') as obj_file:
         for line_number, line in enumerate(obj_file):
             line = line.rstrip()
             if line_number == 0:
                 cluster_packet_id = int(line[1:].decode())
             elif line_number == 1:
                 sample = Sample.deserialize(line.decode())
             else:
                 if line.decode() == '-':
                     if cluster_lines:
                         clusters.append(Cluster.deserialize("\n".join(cluster_lines)))
                     cluster_lines = []
                 else:
                     cluster_lines.append(line.decode())
     return ClusterPacket(cluster_packet_id, sample, clusters)
Beispiel #2
0
 def deserialize(file_path):
     molecules = []
     with open(file_path, 'rb') as obj_file:
         for line_number, line in enumerate(obj_file):
             line = line.rstrip()
             if line_number == 0:
                 molecule_packet_id = int(line[1:].decode(encoding="ascii"))
             elif line_number == 1:
                 sample = Sample.deserialize(line.decode(encoding="ascii"))
             else:
                 molecules.append(
                     Molecule.deserialize(line.decode(encoding="ascii")))
     return MoleculePacket(molecule_packet_id, sample, molecules)