Beispiel #1
0
    def train_model(self, inputs, outputs, train):
        # Create a file with the trained data
        f = open("./data_train.csv", "w")

        for x0, y0 in zip(inputs[train], outputs[train]):
            y0 = np.array(y0)
            line = ",".join(np.insert(x0, len(x0), y0))
            f.write(line + "\n")
        f.close()

        # Use the training file created previously to train a BigML model
        source = check_resource(
            self.api.create_source(
                './data_train.csv', {
                    'term_analysis': {
                        "enabled": False
                    },
                    'source_parser': {
                        "locale": "en-US"
                    }
                }), self.api.get_source)
        dataset = check_resource(self.api.create_dataset(source),
                                 self.api.get_dataset)
        model = check_resource(self.api.create_model(dataset),
                               self.api.get_model)
        local_model = Model(model)

        return [source, dataset, model, local_model]
def i_check_create_evaluations(step, number_of_evaluations=None):
    if number_of_evaluations is not None:
        world.number_of_evaluations = int(number_of_evaluations)
    evaluations_file = "%s%sevaluations" % (world.directory, os.sep)
    evaluation_ids = []
    number_of_lines = 0
    count = 0
    while world.number_of_evaluations != number_of_lines and count < 10:
        number_of_lines = 0
        for line in open(evaluations_file, "r"):
            number_of_lines += 1
            evaluation_id = line.strip()
            evaluation_ids.append(evaluation_id)
        if world.number_of_evaluations != number_of_lines:
            time.sleep(10)
            count += 1
    if world.number_of_evaluations != number_of_lines:
        assert False, "number of evaluations %s and number of lines in evaluations file %s: %s" % (world.number_of_evaluations, evaluation_file, number_of_lines)
    world.evaluation_ids = evaluation_ids
    for evaluation_id in evaluation_ids:
        try:
            evaluation = check_resource(evaluation_id, world.api.get_evaluation)
            world.evaluations.append(evaluation_id)
            assert True
        except Exception, exc:
            assert False, str(exc)
def i_check_create_models_in_ensembles(step, in_ensemble=True):
    model_file = "%s%smodels" % (world.directory, os.sep)
    number_of_lines = 0
    count = 0
    while world.number_of_models != number_of_lines and count < 10:
        number_of_lines = 0
        model_ids = []
        for line in open(model_file, "r"):
            number_of_lines += 1
            model_id = line.strip()
            model_ids.append(model_id)
        if world.number_of_models != number_of_lines:
            time.sleep(10)
            count += 1
    if world.number_of_models != number_of_lines:
        assert False, "number of models %s and number of lines in models file %s: %s" % (world.number_of_models, model_file, number_of_lines)
    world.model_ids = model_ids
    for model_id in model_ids:
        try:
            model = check_resource(model_id, world.api.get_model)
            if in_ensemble:
                ensemble_id = "ensemble/%s" % model['object']['ensemble_id']
                if not ensemble_id in world.ensembles:
                    world.ensembles.append(ensemble_id) 
            else:
                world.models.append(model_id)
   
            assert True
        except Exception, exc:
            assert False, str(exc)
Beispiel #4
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def retrieve_resource(api,
                      resource_id,
                      query_string=ONLY_MODEL,
                      no_check_fields=False):
    """ Retrieves resource info either from a local repo or
        from the remote server

    """
    if api.storage is not None:
        try:
            stored_resource = "%s%s%s" % (api.storage, os.sep,
                                          resource_id.replace("/", "_"))
            with open(stored_resource) as resource_file:
                resource = json.loads(resource_file.read())
            # we check that the stored resource has enough fields information
            # for local predictions to work. Otherwise we should retrieve it.
            if no_check_fields or check_model_fields(resource):
                return resource
        except ValueError:
            raise ValueError("The file %s contains no JSON")
        except IOError:
            pass
    if api.auth == '?username=;api_key=;':
        raise ValueError("The credentials information is missing. This"
                         " information is needed to download resource %s"
                         " for the first time and store it locally for further"
                         " use. Please export BIGML_USERNAME"
                         " and BIGML_API_KEY." % resource_id)
    api_getter = api.getters[get_resource_type(resource_id)]
    resource = check_resource(resource_id, api_getter, query_string)
    return resource
Beispiel #5
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def field_attribute_value(step,
                          field=None,
                          attribute=None,
                          attribute_value=None):
    dataset = check_resource(world.dataset['resource'], world.api.get_dataset)
    fields = dataset['object']['fields']
    eq_(fields[field][attribute], attribute_value)
def i_check_create_evaluations(step, number_of_evaluations=None):
    if number_of_evaluations is not None:
        world.number_of_evaluations = int(number_of_evaluations)
    evaluations_file = "%s%sevaluations" % (world.directory, os.sep)
    evaluation_ids = []
    number_of_lines = 0
    count = 0
    while world.number_of_evaluations != number_of_lines and count < 10:
        number_of_lines = 0
        for line in open(evaluations_file, "r"):
            number_of_lines += 1
            evaluation_id = line.strip()
            evaluation_ids.append(evaluation_id)
        if world.number_of_evaluations != number_of_lines:
            time.sleep(10)
            count += 1
    if world.number_of_evaluations != number_of_lines:
        assert False, "number of evaluations %s and number of lines in evaluations file %s: %s" % (
            world.number_of_evaluations, evaluation_file, number_of_lines)
    world.evaluation_ids = evaluation_ids
    for evaluation_id in evaluation_ids:
        try:
            evaluation = check_resource(evaluation_id,
                                        world.api.get_evaluation)
            world.evaluations.append(evaluation_id)
            assert True
        except Exception, exc:
            assert False, str(exc)
def i_check_create_models_in_ensembles(step, in_ensemble=True):
    model_file = "%s%smodels" % (world.directory, os.sep)
    number_of_lines = 0
    count = 0
    while world.number_of_models != number_of_lines and count < 10:
        number_of_lines = 0
        model_ids = []
        for line in open(model_file, "r"):
            number_of_lines += 1
            model_id = line.strip()
            model_ids.append(model_id)
        if world.number_of_models != number_of_lines:
            time.sleep(10)
            count += 1
    if world.number_of_models != number_of_lines:
        assert False, "number of models %s and number of lines in models file %s: %s" % (
            world.number_of_models, model_file, number_of_lines)
    world.model_ids = model_ids
    for model_id in model_ids:
        try:
            model = check_resource(model_id, world.api.get_model)
            if in_ensemble:
                ensemble_id = "ensemble/%s" % model['object']['ensemble_id']
                if not ensemble_id in world.ensembles:
                    world.ensembles.append(ensemble_id)
            else:
                world.models.append(model_id)

            assert True
        except Exception, exc:
            assert False, str(exc)
def i_check_create_models(step):
    model_file = "%s%smodels" % (world.directory, os.sep)
    model_ids = []
    number_of_lines = 0
    count = 0
    while world.number_of_models != number_of_lines and count < 10:
        number_of_lines = 0
        for line in open(model_file, "r"):
            number_of_lines += 1
            model_id = line.strip()
            model_ids.append(model_id)
        if world.number_of_models != number_of_lines:
            time.sleep(10)
            count += 1
    if world.number_of_models != number_of_lines:
        assert False, "number of models %s and number of lines in models file %s: %s" % (
            world.number_of_models, model_file, number_of_lines)
    world.model_ids = model_ids
    for model_id in model_ids:
        try:
            model = check_resource(model_id, world.api.get_model)
            world.models.append(model_id)
            assert True
        except Exception, exc:
            assert False, str(exc)
Beispiel #9
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    def __init__(self, ensemble, api=None, max_models=None):

        if api is None:
            self.api = BigML(storage=STORAGE)
        else:
            self.api = api
        self.ensemble_id = None
        if isinstance(ensemble, list):
            try:
                models = [get_model_id(model) for model in ensemble]
            except ValueError:
                raise ValueError('Failed to verify the list of models. Check '
                                 'your model id values.')
            self.distributions = None
        else:
            self.ensemble_id = get_ensemble_id(ensemble)
            ensemble = check_resource(ensemble, self.api.get_ensemble)
            models = ensemble['object']['models']
            self.distributions = ensemble['object'].get('distributions', None)
        self.model_ids = models
        self.fields = self.all_model_fields()

        number_of_models = len(models)
        if max_models is None:
            self.models_splits = [models]
        else:
            self.models_splits = [models[index:(index + max_models)] for index
                                  in range(0, number_of_models, max_models)]
        if len(self.models_splits) == 1:
            models = [retrieve_resource(self.api, model_id,
                                        query_string=ONLY_MODEL)
                      for model_id in self.models_splits[0]]
            self.multi_model = MultiModel(models, self.api)
Beispiel #10
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    def __init__(self, ensemble, api=None, max_models=None):

        if api is None:
            self.api = BigML(storage=STORAGE)
        else:
            self.api = api
        self.ensemble_id = None
        if isinstance(ensemble, list):
            try:
                models = [get_model_id(model) for model in ensemble]
            except ValueError:
                raise ValueError('Failed to verify the list of models. Check '
                                 'your model id values.')
            self.distributions = None
        else:
            self.ensemble_id = get_ensemble_id(ensemble)
            ensemble = check_resource(ensemble, self.api.get_ensemble)
            models = ensemble['object']['models']
            self.distributions = ensemble['object'].get('distributions', None)
        self.model_ids = models
        self.fields = self.all_model_fields()

        number_of_models = len(models)
        if max_models is None:
            self.models_splits = [models]
        else:
            self.models_splits = [models[index:(index + max_models)] for index
                                  in range(0, number_of_models, max_models)]
        if len(self.models_splits) == 1:
            models = [retrieve_resource(self.api, model_id,
                                        query_string=ONLY_MODEL)
                      for model_id in self.models_splits[0]]
            self.multi_model = MultiModel(models, self.api)
Beispiel #11
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def retrieve_resource(api,
                      resource_id,
                      query_string='limit=-1;',
                      no_check_fields=False):
    """ Retrieves resource info either from a local repo or
        from the remote server

    """
    if api.storage is not None:
        try:
            stored_resource = "%s%s%s" % (api.storage, os.sep,
                                          resource_id.replace("/", "_"))
            with open(stored_resource) as resource_file:
                resource = json.loads(resource_file.read())
            # we check that the stored resource has enough fields information
            # for local predictions to work. Otherwise we should retrieve it.
            if no_check_fields or check_model_fields(resource):
                return resource
        except ValueError:
            raise ValueError("The file %s contains no JSON")
        except IOError:
            pass
    api_getter = api.getters[get_resource_type(resource_id)]
    resource = check_resource(resource_id, api_getter, query_string)
    return resource
def i_check_source_exists_by_id(step, source_id):
    source = check_resource(source_id, world.api.get_source)
    if (source['code'] != HTTP_NOT_FOUND):
        assert True
        world.source = source
    else:
        assert False
def i_check_dataset_exists_by_id(step, dataset_id):
    dataset = check_resource(dataset_id, world.api.get_dataset)
    if (dataset['code'] != HTTP_NOT_FOUND):
        assert True
        world.dataset = dataset
    else:
        assert False
def i_check_source_exists_by_id(step, source_id):
    source = check_resource(source_id,
                            world.api.get_source)
    if (source['code'] != HTTP_NOT_FOUND):
        assert True
        world.source = source
    else:
        assert False
def i_check_dataset_exists_by_id(step, dataset_id):
    dataset = check_resource(dataset_id,
                             world.api.get_dataset)
    if (dataset['code'] != HTTP_NOT_FOUND):
        assert True
        world.dataset = dataset
    else:
        assert False
Beispiel #16
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def local_batch_predict(models, headers, test_reader, exclude, fields, resume,
                        output_path, max_models, number_of_tests, api, output,
                        verbosity, method, objective_field, session_file,
                        debug):
    """Get local predictions form partial Multimodel, combine and save to file

    """
    def draw_progress_bar(current, total):
        """Draws a text based progress report.

        """
        pct = 100 - ((total - current) * 100) / (total)
        console_log("Predicted on %s out of %s models [%s%%]" % (
            localize(current), localize(total), pct))

    models_total = len(models)
    models_splits = [models[index:(index + max_models)] for index
                     in range(0, models_total, max_models)]
    input_data_list = []
    for row in test_reader:
        for index in exclude:
            del row[index]
        input_data_list.append(fields.pair(row, headers,
                                           objective_field))
    total_votes = []
    models_count = 0
    for models_split in models_splits:
        if resume:
            for model in models_split:
                pred_file = get_predictions_file_name(model,
                                                      output_path)
                u.checkpoint(u.are_predictions_created,
                             pred_file,
                             number_of_tests, debug=debug)
        complete_models = []
        for index in range(len(models_split)):
            complete_models.append(api.check_resource(
                models_split[index], api.get_model))

        local_model = MultiModel(complete_models)
        local_model.batch_predict(input_data_list,
                                  output_path, reuse=True)
        votes = local_model.batch_votes(output_path)
        models_count += max_models
        if models_count > models_total:
            models_count = models_total
        if verbosity:
            draw_progress_bar(models_count, models_total)
        if total_votes:
            for index in range(0, len(votes)):
                predictions = total_votes[index].predictions
                predictions.extend(votes[index].predictions)
        else:
            total_votes = votes
    message = u.dated("Combining predictions.\n")
    u.log_message(message, log_file=session_file, console=verbosity)
    for multivote in total_votes:
        u.write_prediction(multivote.combine(method), output)
Beispiel #17
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def reify_resources(args, api, logger):
    """ Extracts the properties of the created resources and generates
        code to rebuild them

    """

    resource_id = get_resource_id(args.resource_id)
    if resource_id is None:
        sys.exit("Failed to match a valid resource ID. Please, check: %s" %
                 args.resource_id)

    # check whether the resource exists
    try:
        check_resource(resource_id, raise_on_error=True, api=api)
    except Exception, exc:
        sys.exit("Failed to find the resource %s. Please, check its ID and"
                 " the connection info (domain and credentials)." %
                 resource_id)
Beispiel #18
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def reify_resources(args, api, logger):
    """ Extracts the properties of the created resources and generates
        code to rebuild them

    """

    resource_id = get_resource_id(args.resource_id)
    if resource_id is None:
        sys.exit("Failed to match a valid resource ID. Please, check: %s"
                 % args.resource_id)

    # check whether the resource exists
    try:
        check_resource(resource_id, raise_on_error=True, api=api)
    except Exception, exc:
        sys.exit("Failed to find the resource %s. Please, check its ID and"
                 " the connection info (domain and credentials)." %
                 resource_id)
Beispiel #19
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def i_check_create_fusion(step):
    fs_file = "%s%sfusions" % (world.directory, os.sep)
    try:
        fs_file = open(fs_file, "r")
        fs = check_resource(fs_file.readline().strip(), world.api.get_fusion)
        world.fusions.append(fs['resource'])
        world.fusion = fs
        fs_file.close()
    except Exception, exc:
        assert False, str(exc)
Beispiel #20
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def i_check_create_pca_model(step):
    pca_file = "%s%spcas" % (world.directory, os.sep)
    try:
        pca_file = open(pca_file, "r")
        pca = check_resource(pca_file.readline().strip(), world.api.get_pca)
        world.pcas.append(pca['resource'])
        world.pca = pca
        pca_file.close()
    except Exception, exc:
        assert False, str(exc)
 def upload_source(self,filename):
     """
     Upload a sourcefile to BigML. Return resource value.
     """
     assert self.authenticated, 'Not authenticated!'
     
     # check if source file has already been uploaded  
     query_string = 'name={}'.format(filename)
     matching_sources = self.api.list_sources(query_string)['objects']  
     if len(matching_sources) > 0:
         source = matching_sources[0]
         self.logger.info('{0} is already present in BigML'.format(basename(filename)))
     else:
         self.logger.info('uploading source to BigML...')
         source = self.api.create_source(filename,{'name':filename})
         # enter polling loop until source becomes ready
         check_resource(source['resource'],self.api.get_source)  
     
     return source['resource']
def i_check_create_time_series(step):
    ts_file = "%s%stime_series" % (world.directory, os.sep)
    try:
        ts_file = open(ts_file, "r")
        ts = check_resource(ts_file.readline().strip(),
                            world.api.get_time_series)
        world.time_series_set.append(ts['resource'])
        world.time_series = ts
        ts_file.close()
    except Exception, exc:
        assert False, str(exc)
def i_check_create_source(step):
    source_file = "%s%ssource" % (world.directory, os.sep)
    try:
        source_file = open(source_file, "r")
        source = check_resource(source_file.readline().strip(), world.api.get_source)
        world.sources.append(source["resource"])
        world.source = source
        source_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
def i_check_create_ensemble(step):
    ensemble_file = "%s%sensembles" % (world.directory, os.sep)
    try:
        ensemble_file = open(ensemble_file, "r")
        ensemble = check_resource(ensemble_file.readline().strip(), world.api.get_ensemble)
        world.ensembles.append(ensemble["resource"])
        world.ensemble = ensemble
        ensemble_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
def i_check_create_project(step, organization=False):
    project_file = "%s%sproject" % (world.directory, os.sep)
    try:
        project_file = open(project_file, "r")
        project = check_resource(project_file.readline().strip(),
                                 world.api.get_project)
        world.projects.append(project['resource'])
        world.project = project
        project_file.close()
    except Exception, exc:
        assert False, str(exc)
Beispiel #26
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def i_check_create_script(step):
    script_file = "%s%sscripts" % (world.directory, os.sep)
    try:
        script_file = open(script_file, "r")
        script = check_resource(script_file.readline().strip(),
                                world.api.get_script)
        world.scripts.append(script['resource'])
        world.script = script
        script_file.close()
    except Exception, exc:
        assert False, str(exc)
def i_check_create_evaluation(step):
    evaluation_file = "%s%sevaluations" % (world.directory, os.sep)
    try:
        evaluation_file = open(evaluation_file, "r")
        evaluation = check_resource(evaluation_file.readline().strip(), world.api.get_evaluation)
        world.evaluations.append(evaluation["resource"])
        world.evaluation = evaluation
        evaluation_file.close()
        assert True
    except:
        assert False
Beispiel #28
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def i_check_create_multi_dataset(step):
    dataset_file = "%s%sdataset_multi" % (world.directory, os.sep)
    try:
        with open(dataset_file, "r") as dataset_file_handler:
            dataset_id = dataset_file_handler.readline().strip()
        dataset = check_resource(dataset_id, world.api.get_dataset)
        world.datasets.append(dataset['resource'])
        world.dataset = dataset
        assert True
    except Exception, exc:
        assert False, str(exc)
Beispiel #29
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def i_check_create_fusion(step):
    fs_file = "%s%sfusions" % (world.directory, os.sep)
    try:
        fs_file = open(fs_file, "r")
        fs = check_resource(fs_file.readline().strip(),
                            world.api.get_fusion)
        world.fusions.append(fs['resource'])
        world.fusion = fs
        fs_file.close()
    except Exception, exc:
        assert False, str(exc)
Beispiel #30
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def i_check_create_library(step):
    library_file = os.path.join(world.directory, "library")
    try:
        library_file = open(library_file, "r")
        library = check_resource(library_file.readline().strip(),
                                 world.api.get_library)
        world.libraries.append(library['resource'])
        world.library = library
        library_file.close()
    except Exception, exc:
        assert False, str(exc)
def i_check_create_model(step):
    model_file = "%s%smodels" % (world.directory, os.sep)
    try:
        model_file = open(model_file, "r")
        model = check_resource(model_file.readline().strip(), world.api.get_model)
        world.models.append(model["resource"])
        world.model = model
        model_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
Beispiel #32
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def i_check_create_library(step):
    library_file = os.path.join(world.directory, "library")
    try:
        library_file = open(library_file, "r")
        library = check_resource(library_file.readline().strip(),
                                 world.api.get_library)
        world.libraries.append(library['resource'])
        world.library = library
        library_file.close()
    except Exception, exc:
        assert False, str(exc)
def i_check_create_time_series(step):
    ts_file = "%s%stime_series" % (world.directory, os.sep)
    try:
        ts_file = open(ts_file, "r")
        ts = check_resource(ts_file.readline().strip(),
                            world.api.get_time_series)
        world.time_series_set.append(ts['resource'])
        world.time_series = ts
        ts_file.close()
    except Exception, exc:
        assert False, str(exc)
Beispiel #34
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def i_check_create_script(step):
    script_file = "%s%sscripts" % (world.directory, os.sep)
    try:
        script_file = open(script_file, "r")
        script = check_resource(script_file.readline().strip(),
                                world.api.get_script)
        world.scripts.append(script['resource'])
        world.script = script
        script_file.close()
    except Exception, exc:
        assert False, str(exc)
def i_check_create_batch_anomaly_score_dataset(step):
    dataset_file = "%s%sbatch_anomaly_score_dataset" % (world.directory, os.sep)
    try:
        dataset_file = open(dataset_file, "r")
        dataset = check_resource(dataset_file.readline().strip(),
                                 api=world.api)
        world.datasets.append(dataset['resource'])
        dataset_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
Beispiel #36
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def i_check_create_dn_model(step):
    dn_file = "%s%sdeepnets" % (world.directory, os.sep)
    try:
        dn_file = open(dn_file, "r")
        dn = check_resource(dn_file.readline().strip(), world.api.get_deepnet)
        world.deepnets.append(dn['resource'])
        world.deepnet = dn
        dn_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
def i_check_external_connector(step):
    connector_file = "%s%sexternal_connector" % (world.directory, os.sep)
    try:
        connector_file = open(connector_file, "r")
        connector = check_resource(connector_file.readline().strip(),
                                   world.api.get_external_connector)
        world.external_connectors.append(connector['resource'])
        world.external_connector = connector
        connector_file.close()
    except Exception, exc:
        assert False, str(exc)
def i_check_create_project(step, organization=False):
    project_file = "%s%sproject" % (world.directory, os.sep)
    try:
        project_file = open(project_file, "r")
        project = check_resource(project_file.readline().strip(),
                                 world.api.get_project)
        world.projects.append(project['resource'])
        world.project = project
        project_file.close()
    except Exception, exc:
        assert False, str(exc)
Beispiel #39
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def i_check_create_pca_model(step):
    pca_file = "%s%spcas" % (world.directory, os.sep)
    try:
        pca_file = open(pca_file, "r")
        pca = check_resource(pca_file.readline().strip(),
                             world.api.get_pca)
        world.pcas.append(pca['resource'])
        world.pca = pca
        pca_file.close()
    except Exception, exc:
        assert False, str(exc)
def i_check_create_batch_anomaly_score_dataset(step):
    dataset_file = "%s%sbatch_anomaly_score_dataset" % (world.directory, os.sep)
    try:
        dataset_file = open(dataset_file, "r")
        dataset = check_resource(dataset_file.readline().strip(),
                                 api=world.api)
        world.datasets.append(dataset['resource'])
        dataset_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
Beispiel #41
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def i_check_create_dataset(step, dataset_type=None):
    dataset_file = "%s%sdataset_%s" % (world.directory, os.sep, dataset_type)
    try:
        dataset_file = open(dataset_file, "r")
        dataset = check_resource(dataset_file.readline().strip(),
                                 world.api.get_dataset)
        world.datasets.append(dataset['resource'])
        world.dataset = dataset
        dataset_file.close()
    except Exception, exc:
        assert False, str(exc)
Beispiel #42
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def i_check_create_cluster(step):
    cluster_file = "%s%sclusters" % (world.directory, os.sep)
    try:
        cluster_file = open(cluster_file, "r")
        cluster = check_resource(cluster_file.readline().strip(),
                                 world.api.get_cluster)
        world.clusters.append(cluster['resource'])
        world.cluster = cluster
        cluster_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
Beispiel #43
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def i_check_create_lr_model(step):
    lr_file = "%s%slinear_regressions" % (world.directory, os.sep)
    try:
        lr_file = open(lr_file, "r")
        lr = check_resource(lr_file.readline().strip(),
                            world.api.get_linear_regression)
        world.linear_regressions.append(lr['resource'])
        world.linear_regression = lr
        lr_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
Beispiel #44
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def i_check_create_association(step):
    association_file = os.path.join(world.directory, "associations")
    try:
        association_file = open(association_file, "r")
        association = check_resource(association_file.readline().strip(),
                                     world.api.get_association)
        world.associations.append(association['resource'])
        world.association = association
        association_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
def i_check_create_multi_dataset(step):
    dataset_file = "%s%sdataset_multi" % (world.directory, os.sep)
    try:
        with open(dataset_file, "r") as dataset_file_handler:
            dataset_id = dataset_file_handler.readline().strip()
        dataset = check_resource(dataset_id,
                                 world.api.get_dataset)
        world.datasets.append(dataset['resource'])
        world.dataset = dataset
        assert True
    except Exception, exc:
        assert False, str(exc)
def i_check_create_test_dataset(step):
    test_dataset_file = "%s%sdataset_test" % (world.directory, os.sep)
    try:
        test_dataset_file = open(test_dataset_file, "r")
        test_dataset = check_resource(test_dataset_file.readline().strip(),
                                      world.api.get_dataset)
        world.datasets.append(test_dataset['resource'])
        world.test_dataset = test_dataset
        test_dataset_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
def i_check_create_cluster(step):
    cluster_file = "%s%sclusters" % (world.directory, os.sep)
    try:
        cluster_file = open(cluster_file, "r")
        cluster = check_resource(cluster_file.readline().strip(),
                                 world.api.get_cluster)
        world.clusters.append(cluster['resource'])
        world.cluster = cluster
        cluster_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
Beispiel #48
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def i_check_create_sample(step):
    sample_file = "%s%ssamples" % (world.directory, os.sep)
    try:
        sample_file = open(sample_file, "r")
        sample = check_resource(sample_file.readline().strip(),
                                world.api.get_sample)
        world.samples.append(sample['resource'])
        world.sample = sample
        sample_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
Beispiel #49
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    def train_model(self, inputs, outputs, train):
        # Create a file with the trained data
        f = open("./data_train.csv", "w")

        for x0, y0 in zip(inputs[train],outputs[train]):
            y0 = np.array(y0)
            line = ",".join(np.insert(x0, len(x0), y0))
            f.write(line+"\n")
        f.close()

        # Use the training file created previously to train a BigML model
        source = check_resource(self.api.create_source('./data_train.csv',
                                                        {
                                                        'term_analysis' : {"enabled": False},
                                                        'source_parser' : {"locale": "en-US"}
                                                        }), self.api.get_source)
        dataset = check_resource(self.api.create_dataset(source), self.api.get_dataset)
        model = check_resource(self.api.create_model(dataset), self.api.get_model)
        local_model = Model(model)

        return [source,dataset, model, local_model]
def i_check_create_anomaly(step):
    anomaly_file = "%s%sanomalies" % (world.directory, os.sep)
    try:
        anomaly_file = open(anomaly_file, "r")
        anomaly = check_resource(anomaly_file.readline().strip(),
                                 api=world.api)
        world.anomalies.append(anomaly['resource'])
        world.anomaly = anomaly
        anomaly_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
Beispiel #51
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def i_check_create_test_source(step):
    test_source_file = "%s%ssource_test" % (world.directory, os.sep)
    try:
        test_source_file = open(test_source_file, "r")
        test_source = check_resource(test_source_file.readline().strip(),
                                     world.api.get_source)
        world.sources.append(test_source['resource'])
        world.test_source = test_source
        test_source_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
Beispiel #52
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def i_check_create_package_script(step, package_dir=None):
    script_file = os.path.join(world.directory, os.path.basename(package_dir),
                               "scripts")
    try:
        script_file = open(script_file, "r")
        script = check_resource(script_file.readline().strip(),
                                world.api.get_script)
        world.scripts.append(script['resource'])
        world.script = script
        script_file.close()
    except Exception, exc:
        assert False, str(exc)
def i_check_create_anomaly(step):
    anomaly_file = "%s%sanomalies" % (world.directory, os.sep)
    try:
        anomaly_file = open(anomaly_file, "r")
        anomaly = check_resource(anomaly_file.readline().strip(),
                                 api=world.api)
        world.anomalies.append(anomaly['resource'])
        world.anomaly = anomaly
        anomaly_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
Beispiel #54
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def i_check_create_dn_model(step):
    dn_file = "%s%sdeepnets" % (world.directory, os.sep)
    try:
        dn_file = open(dn_file, "r")
        dn = check_resource(dn_file.readline().strip(),
                            world.api.get_deepnet)
        world.deepnets.append(dn['resource'])
        world.deepnet = dn
        dn_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
def i_check_create_lr_model(step):
    lr_file = "%s%slinear_regressions" % (world.directory, os.sep)
    try:
        lr_file = open(lr_file, "r")
        lr = check_resource(lr_file.readline().strip(),
                            world.api.get_linear_regression)
        world.linear_regressions.append(lr['resource'])
        world.linear_regression = lr
        lr_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
Beispiel #56
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def i_check_create_sample(step):
    sample_file = "%s%ssamples" % (world.directory, os.sep)
    try:
        sample_file = open(sample_file, "r")
        sample = check_resource(sample_file.readline().strip(),
                                world.api.get_sample)
        world.samples.append(sample['resource'])
        world.sample = sample
        sample_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
Beispiel #57
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def i_check_create_topic_model(step):
    topic_model_file = "%s%stopic_models" % (world.directory, os.sep)
    try:
        topic_model_file = open(topic_model_file, "r")
        topic_model = check_resource(topic_model_file.readline().strip(),
                                     world.api.get_topic_model)
        world.topic_models.append(topic_model['resource'])
        world.topic_model = topic_model
        topic_model_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
def i_check_create_topic_model(step):
    topic_model_file = "%s%stopic_models" % (world.directory, os.sep)
    try:
        topic_model_file = open(topic_model_file, "r")
        topic_model = check_resource(topic_model_file.readline().strip(),
                                     world.api.get_topic_model)
        world.topic_models.append(topic_model['resource'])
        world.topic_model = topic_model
        topic_model_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)
def i_check_create_batch_prediction(step):
    batch_prediction_file = "%s%sbatch_prediction" % (world.directory, os.sep)
    try:
        batch_prediction_file = open(batch_prediction_file, "r")
        batch_prediction = check_resource(batch_prediction_file.readline().strip(),
                                          world.api.get_batch_prediction)
        world.batch_predictions.append(batch_prediction['resource'])
        world.batch_prediction = batch_prediction
        batch_prediction_file.close()
        assert True
    except Exception, exc:
        assert False, str(exc)