def test_complex_set_equality(self):
sp1 = Species(name='test_species_a')
sp2 = Species(name='test_species_b')
# test whether two reactions with the same species are equal
rxn1 = Reaction(inputs=[sp1], outputs=[], k=0.1, input_coefs=[1])
rtn = Reaction.complex_set_equality(c1=rxn1.inputs,
c1_coefs=rxn1.input_coefs,
c2=rxn1.inputs,
c2_coefs=rxn1.input_coefs)
self.assertTrue(rtn)
# test that two reactions have the two species with equal coefficients are equal
rxn2 = Reaction(inputs=[sp1],
outputs=[sp2],
k=0.1,
input_coefs=[1],
output_coefs=[1])
rtn = Reaction.complex_set_equality(c1=rxn1.inputs,
c1_coefs=rxn1.input_coefs,
c2=rxn2.inputs,
c2_coefs=rxn2.input_coefs)
self.assertTrue(rtn)
# test that two reactions have the two species with different coefficients are not equal
rxn1 = Reaction(inputs=[sp1], outputs=[], k=0.1, input_coefs=[1])
rxn2 = Reaction(inputs=[sp2], outputs=[], k=0.1, input_coefs=[2])
rtn2 = Reaction.complex_set_equality(c1=rxn1.inputs,
c1_coefs=rxn1.input_coefs,
c2=rxn2.inputs,
c2_coefs=rxn2.input_coefs)
self.assertFalse(rtn2)
# test that two reactions with different species are not equal
rxn1 = Reaction(inputs=[sp1, sp2],
outputs=[],
k=0.1,
input_coefs=[1, 2])
rxn2 = Reaction(inputs=[sp2], outputs=[], k=0.1, input_coefs=[2])
rtn3 = Reaction.complex_set_equality(c1=rxn1.inputs,
c1_coefs=rxn1.input_coefs,
c2=rxn2.inputs,
c2_coefs=rxn2.input_coefs)
self.assertFalse(rtn3)
def test_complex_set_equality(self):
from biocrnpyler import Reaction
from biocrnpyler import Species
rxn1 = Reaction(inputs=[], outputs=[], k=0.1)
rxn2 = Reaction(inputs=[], outputs=[], k=0.1)
rtn = Reaction.complex_set_equality(c1=rxn1.inputs,
c1_coefs=rxn1.input_coefs,
c2=rxn2.inputs,
c2_coefs=rxn2.output_coefs)
self.assertTrue(rtn)
sp1 = Species(name='test_species_a')
sp2 = Species(name='test_species_b')
rxn1 = Reaction(inputs=[sp1], outputs=[], k=0.1)
rxn2 = Reaction(inputs=[sp2], outputs=[], k=0.1)
rtn2 = Reaction.complex_set_equality(c1=rxn1.inputs,
c1_coefs=rxn1.input_coefs,
c2=rxn2.inputs,
c2_coefs=rxn2.output_coefs)
self.assertFalse(rtn2)
