Beispiel #1
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    def environment_signal(self, env_window, scale, sig_window, edge):

        # add stub character to scale, to extend loose ends sequence
        fill_character = '#'
        scale[fill_character] = 0.0

        # obtain subsequence (filled at the ends)
        subseq = self.seq_env(env_window, fill_character=fill_character)

        # obtain the signal and append to result
        return sequtil.seq_signal(subseq, scale, sig_window, edge)
Beispiel #2
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 def sequence_signal(self, scale, window, edge):
     return sequtil.seq_signal(self.protein_sequence, scale, window, edge)
Beispiel #3
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 def sequence_signal(self, scale, window, edge):
     return sequtil.seq_signal(self.protein_sequence, scale, window, edge)