def profileTargets(tccList, cName, dir=None, min=0):
if not dir:
dir = 'out'
cg.clearDirectory(dir) #clear and/or make
for tcc in tccList:
plot.plotASProfile(tcc, cName, directory=dir, min=min)
def profileTargets(tccList, cName, dir = None, min = 0): if not dir: dir = 'out' cg.clearDirectory(dir) #clear and/or make for tcc in tccList: plot.plotASProfile(tcc, cName, directory = dir, min = min)
def plotResults(fN, cName=None):
cHairs = getHairpins.getHairpins(fN) #CID: HAIRPIN
directory = cg.getBaseFileName(fN)
cg.clearDirectory(directory)
#change the directory before plotting
cwd = os.getcwd()
os.chdir(directory)
for CID in cHairs:
print 'plotting:', CID
cgPlot.plotASProfile(cHairs[CID], cName)
os.chdir(cwd)
def plotResults(fN, cName = None): cHairs = getHairpins.getHairpins(fN) #CID: HAIRPIN directory = cg.getBaseFileName(fN) cg.clearDirectory(directory) #change the directory before plotting cwd = os.getcwd() os.chdir(directory) for CID in cHairs: print 'plotting:', CID cgPlot.plotASProfile(cHairs[CID], cName) os.chdir(cwd)