def test_override_kde_grid(self):
c = ChainConsumer()
x, y = np.linspace(0, 10, 10), np.linspace(0, 10, 10)
z = np.ones((10, 10))
c.add_chain([x, y], weights=z, grid=True, kde=2.0)
c.configure()
assert not c.chains[0].config["kde"]
def test_pass_in_dataframe1(self):
df = pd.DataFrame(self.d2, columns=self.p)
c = ChainConsumer()
c.add_chain(df)
summary1 = c.analysis.get_summary()
assert np.isclose(summary1["a"][0], -1, atol=0.03)
assert np.isclose(summary1["a"][1], 0, atol=0.05)
assert np.isclose(summary1["a"][2], 1, atol=0.03)
assert np.isclose(summary1["b"][0], -1, atol=0.03)
assert np.isclose(summary1["c"][0], -1, atol=0.03)
def test_pass_in_dataframe3(self):
data = np.random.uniform(-4, 6, size=(1000000, 1))
weight = norm.pdf(data)
df = pd.DataFrame(data, columns=["a"])
df["weight"] = weight
c = ChainConsumer()
c.add_chain(df)
summary1 = c.analysis.get_summary()
assert np.isclose(summary1["a"][0], -1, atol=0.03)
assert np.isclose(summary1["a"][1], 0, atol=0.05)
assert np.isclose(summary1["a"][2], 1, atol=0.03)
def test_cache_invalidation(self):
c = ChainConsumer()
c.add_chain(normal(size=(1000000, 1)), parameters=["a"])
c.configure(summary_area=0.68)
summary1 = c.analysis.get_summary()
c.configure(summary_area=0.95)
summary2 = c.analysis.get_summary()
assert np.isclose(summary1["a"][0], -1, atol=0.03)
assert np.isclose(summary2["a"][0], -2, atol=0.03)
assert np.isclose(summary1["a"][2], 1, atol=0.03)
assert np.isclose(summary2["a"][2], 2, atol=0.03)
def test_override_kde_grid(self):
c = ChainConsumer()
x, y = np.linspace(0, 10, 10), np.linspace(0, 10, 10)
z = np.ones((10, 10))
c.add_chain([x, y], weights=z, grid=True, kde=2.0)
c.configure()
assert not c.chains[0].config["kde"]
def test_cache_invalidation(self):
c = ChainConsumer()
c.add_chain(normal(size=(1000000, 1)), parameters=["a"])
c.configure(summary_area=0.68)
summary1 = c.analysis.get_summary()
c.configure(summary_area=0.95)
summary2 = c.analysis.get_summary()
assert np.isclose(summary1["a"][0], -1, atol=1e-2)
assert np.isclose(summary2["a"][0], -2, atol=1e-2)
assert np.isclose(summary1["a"][1], summary2["a"][1], atol=1e-2)
assert np.isclose(summary1["a"][2], 1, atol=1e-2)
assert np.isclose(summary2["a"][2], 2, atol=1e-2)
def test_color_data_posterior(self):
c = ChainConsumer()
c.add_chain(self.d,
parameters=self.p,
name=self.n,
weights=self.w,
posterior=np.ones(100))
c.configure(color_params="posterior")
chain = c.chains[0]
assert np.all(chain.get_color_data() == np.ones(100))
def test_color_data_none(self):
c = ChainConsumer()
c.add_chain(self.d,
parameters=self.p,
name=self.n,
weights=self.w,
posterior=np.ones(100))
c.configure(color_params=None)
chain = c.chains[0]
assert chain.get_color_data() is None
def test_color_data_none(self):
c = ChainConsumer()
c.add_chain(self.d, parameters=self.p, name=self.n, weights=self.w, posterior=np.ones(100))
c.configure(color_params=None)
chain = c.chains[0]
assert chain.get_color_data() is None
def test_override_kde(self):
c = ChainConsumer()
c.add_chain(self.d, parameters=self.p, kde=2.0)
c.configure()
assert c.chains[0].config["kde"] == 2.0
def test_override_shade_alpha(self):
c = ChainConsumer()
c.add_chain(self.d, parameters=self.p, shade_alpha=0.8)
c.configure()
assert c.chains[0].config["shade_alpha"] == 0.8
def test_override_linestyle(self):
c = ChainConsumer()
c.add_chain(self.d, parameters=self.p, linestyle="--")
c.configure()
assert c.chains[0].config["linestyle"] == "--"
def test_override_linewidth(self):
c = ChainConsumer()
c.add_chain(self.d, parameters=self.p, linewidth=2.0)
c.configure(linewidths=[100])
assert c.chains[0].config["linewidth"] == 100
def test_override_color(self):
c = ChainConsumer()
c.add_chain(self.d, parameters=self.p, color="#4286f4")
c.configure()
assert c.chains[0].config["color"] == "#4286f4"
def test_override_color(self):
c = ChainConsumer()
c.add_chain(self.d, parameters=self.p, color="#4286f4")
c.configure()
assert c.chains[0].config["color"] == "#4286f4"
def test_color_data_posterior(self):
c = ChainConsumer()
c.add_chain(self.d, parameters=self.p, name=self.n, weights=self.w, posterior=np.ones(100))
c.configure(color_params="posterior")
chain = c.chains[0]
assert np.all(chain.get_color_data() == np.ones(100))
def test_override_linewidth(self):
c = ChainConsumer()
c.add_chain(self.d, parameters=self.p, linewidth=2.0)
c.configure(linewidths=[100])
assert c.chains[0].config["linewidth"] == 100
def test_override_linestyle(self):
c = ChainConsumer()
c.add_chain(self.d, parameters=self.p, linestyle="--")
c.configure()
assert c.chains[0].config["linestyle"] == "--"
def test_override_kde(self):
c = ChainConsumer()
c.add_chain(self.d, parameters=self.p, kde=2.0)
c.configure()
assert c.chains[0].config["kde"] == 2.0
def test_override_shade_alpha(self):
c = ChainConsumer()
c.add_chain(self.d, parameters=self.p, shade_alpha=0.8)
c.configure()
assert c.chains[0].config["shade_alpha"] == 0.8