def __init__(self, *args, **_):
GeneralizedPairState.__init__(self, *args)
self.dp = config.preparers[config.preparer_index][0](constants.window_size)
self.clf_fname = 'data/clf/{}{}{}.clf'.format(
PairClassifier.get_name(),
config.preparers[config.preparer_index][2],
constants.window_size,
)
self.clf = self._get_classifier()
self.annotations, self.ann_x, self.ann_y = None, None, None
self.emission_table = None
def __init__(self, *args, **_):
GeneralizedPairState.__init__(self, *args)
self.dp = config.preparers[config.preparer_index][0](
constants.window_size)
self.clf_fname = 'data/clf/{}{}{}.clf'.format(
PairClassifier.get_name(),
config.preparers[config.preparer_index][2],
constants.window_size,
)
self.clf = self._get_classifier()
self.annotations, self.ann_x, self.ann_y = None, None, None
self.emission_table = None
def __init__(self, *args, **kwargs):
ClassifierState.__init__(self, *args, **kwargs)
self.dp = self._get_preparer(0)
if config.same_classifier:
suffix = ''
else:
suffix = '_indel'
self.clf_fname = 'data/clf/{}{}{}{}.clf'.format(
PairClassifier.get_name(),
config.preparers[config.preparer_index][2],
constants.window_size,
suffix,
)
self.clf = self._get_classifier()
def __init__(self, *args, **kwargs):
ClassifierState.__init__(self, *args, **kwargs)
self.dp = self._get_preparer(0)
if config.same_classifier:
suffix = ''
else:
suffix = '_indel'
self.clf_fname = 'data/clf/{}{}{}{}.clf'.format(
PairClassifier.get_name(),
config.preparers[config.preparer_index][2],
constants.window_size,
suffix,
)
self.clf = self._get_classifier()
