def plot_cai_p3_contourlines(x_bin,y_bin,data,xy_data,
graph_name='cai_contourlines.png',
prob_axes=True, **kwargs):
"""Output a contour plot of cai
takes: x_bin, y_bin, data (data matrix)
label (default 'Unknown Species')
num_genes (default 0 will not print, other numbers will)
size: of graph in inches (default = 8.0)
graph_name: default 'cai_contourlines.png'
"""
plot_data =[(x_bin,y_bin,data)]
plot_contour_lines(plot_data, graph_grid='/', x_label="$P_3$", \
y_label="CAI", prob_axes=prob_axes,**kwargs)
if graph_name is not None:
savefig(graph_name)
def plot_cai_p3_contourlines(x_bin,y_bin,data,xy_data,
graph_name='cai_contourlines.png',
prob_axes=True, **kwargs):
"""Output a contour plot of cai
takes: x_bin, y_bin, data (data matrix)
label (default 'Unknown Species')
num_genes (default 0 will not print, other numbers will)
size: of graph in inches (default = 8.0)
graph_name: default 'cai_contourlines.png'
"""
plot_data =[(x_bin,y_bin,data)]
plot_contour_lines(plot_data, graph_grid='/', x_label="$P_3$", \
y_label="CAI", prob_axes=prob_axes,**kwargs)
if graph_name is not None:
savefig(graph_name)
def plot_p12_p3_contourlines(x_bin,y_bin,data,xy_data, prob_axes=True,\
graph_name='p12_p3_contourlines.png', **kwargs):
"""Outputs a P12 versus P3 contourline graph
and the mean equation of the plot
takes: x_bin, y_bin, data (data matrix)
label (default 'Unknown Species')
num_genes (default 0 will not print, other numbers will)
size: of graph in inches (default = 8.0)
graph_name: default 'p12_p3_contourlines.png
"""
plot_data =[(x_bin,y_bin,data)]
plot_contour_lines(plot_data, graph_grid='/', x_label="$P_3$",\
y_label="$P_{12}$", prob_axes=prob_axes, **kwargs)
set_axis_to_probs()
if graph_name is not None:
savefig(graph_name)
def plot_p12_p3_contourlines(x_bin,y_bin,data,xy_data, prob_axes=True,\
graph_name='p12_p3_contourlines.png', **kwargs):
"""Outputs a P12 versus P3 contourline graph
and the mean equation of the plot
takes: x_bin, y_bin, data (data matrix)
label (default 'Unknown Species')
num_genes (default 0 will not print, other numbers will)
size: of graph in inches (default = 8.0)
graph_name: default 'p12_p3_contourlines.png
"""
plot_data =[(x_bin,y_bin,data)]
plot_contour_lines(plot_data, graph_grid='/', x_label="$P_3$",\
y_label="$P_{12}$", prob_axes=prob_axes, **kwargs)
set_axis_to_probs()
if graph_name is not None:
savefig(graph_name)
